DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta3 and psmb7

DIOPT Version :10

Sequence 1:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster
Sequence 2:XP_021324576.1 Gene:psmb7 / 64278 ZFINID:ZDB-GENE-001208-4 Length:286 Species:Danio rerio


Alignment Length:190 Identity:38/190 - (20%)
Similarity:67/190 - (35%) Gaps:26/190 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTDILTVRDRLMFRKNLYETRENRE 81
            ||.|.:..|.|..........:..|:.:|.|.::....|...|.......:.....|:.....| 
Zfish    52 KDGVVLGADTRATEGMIVADKNCSKIHYISPNIYCCGAGTAADTEMTTQIISSNLELHSLSTGR- 115

  Fly    82 MCPKPFSA--MMSSFLYEHRFGPYFIEPVVAGLDPKTMEPFICNMDLIG------CPNAPDD--- 135
             .|:..:|  |:...|:  |:..|....:|.|           .:|..|      .|:...|   
Zfish   116 -LPRVATANRMLKQMLF--RYQGYIGAALVLG-----------GVDCTGPHLYSIYPHGSTDKLP 166

  Fly   136 FVVAGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAFDRDAMSGWGATVYIIEKDKI 195
            :|..|:.:.....:.|..::||:|.:....::..:|......|..||....|.:|.|.|:
Zfish   167 YVTMGSGSLAAMAVFEDRYRPDMEEEDAKSLVRDAIAAGIFNDLGSGSNIDVCVITKGKV 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 38/190 (20%)
psmb7XP_021324576.1 proteasome_beta_type_7 44..232 CDD:239732 38/190 (20%)
Pr_beta_C 235..280 CDD:463597
Blue background indicates that the domain is not in the aligned region.

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