DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta3 and psmb3

DIOPT Version :9

Sequence 1:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_001123295.1 Gene:psmb3 / 573095 ZFINID:ZDB-GENE-040426-2682 Length:205 Species:Danio rerio


Alignment Length:205 Identity:133/205 - (64%)
Similarity:174/205 - (84%) Gaps:0/205 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSILAYNGGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTDILTVRD 65
            |||::||||.|:|||||:|||||:|.|||||||.::|||:|:|.:|.|:::||.||.||:.||..
Zfish     1 MSIMSYNGGAVMAMRGKECVAIASDRRFGIQAQLVTTDFQKIFPMGERLYIGLAGLATDVQTVSQ 65

  Fly    66 RLMFRKNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPKTMEPFICNMDLIGCP 130
            ||.||.||||.:|.|::.|:.|.:|:|:.|||.|||||:||||:|||||||.|||||::||||||
Zfish    66 RLKFRLNLYELKEGRQIKPRTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPFICSLDLIGCP 130

  Fly   131 NAPDDFVVAGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAFDRDAMSGWGATVYIIEKDKI 195
            ...:||||:|||:||:|||||:||:||::|:.|||.|:|:::||.||||:||.|..|::||||||
Zfish   131 MVTEDFVVSGTCSEQMYGMCESLWEPDMKPEDLFETISQAMLNAVDRDAVSGMGVVVHVIEKDKI 195

  Fly   196 TERTLKTRMD 205
            |.||||.|||
Zfish   196 TTRTLKARMD 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 125/194 (64%)
psmb3NP_001123295.1 PRE1 3..198 CDD:223711 124/194 (64%)
proteasome_beta_type_3 6..201 CDD:239728 125/194 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170573431
Domainoid 1 1.000 265 1.000 Domainoid score I1863
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2089
Inparanoid 1 1.050 299 1.000 Inparanoid score I2687
OMA 1 1.010 - - QHG53924
OrthoDB 1 1.010 - - D1170036at2759
OrthoFinder 1 1.000 - - FOG0003566
OrthoInspector 1 1.000 - - oto40072
orthoMCL 1 0.900 - - OOG6_101970
Panther 1 1.100 - - LDO PTHR11599
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1011
SonicParanoid 1 1.000 - - X2440
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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