DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta3 and PSMB7

DIOPT Version :9

Sequence 1:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_002790.1 Gene:PSMB7 / 5695 HGNCID:9544 Length:277 Species:Homo sapiens


Alignment Length:201 Identity:39/201 - (19%)
Similarity:77/201 - (38%) Gaps:30/201 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFL--GLTGLQTDILTVRDRLMFR 70
            |..:..:..||.:.:..|.|..........:..|:..|.|.::.  ..|...||:.|    .:..
Human    43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTT----QLIS 103

  Fly    71 KNLYETRENREMCPKPFSA--MMSSFLYEHRFGPYFIEPVVAGLDPKTMEPFICNMDLIG----- 128
            .||.....:....|:..:|  |:...|:  |:..|....:|.|           .:|:.|     
Human   104 SNLELHSLSTGRLPRVVTANRMLKQMLF--RYQGYIGAALVLG-----------GVDVTGPHLYS 155

  Fly   129 -CPNAPDD---FVVAGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAFDRDAMSGWGATVYI 189
             .|:...|   :|..|:.:.....:.|..::||:|.::...:::::|......|..||....:.:
Human   156 IYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEAIAAGIFNDLGSGSNIDLCV 220

  Fly   190 IEKDKI 195
            |.|:|:
Human   221 ISKNKL 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 39/201 (19%)
PSMB7NP_002790.1 proteasome_beta_type_7 44..232 CDD:239732 38/200 (19%)
Pr_beta_C 236..271 CDD:403609
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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