DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta3 and PSMB1

DIOPT Version :9

Sequence 1:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_002784.1 Gene:PSMB1 / 5689 HGNCID:9537 Length:241 Species:Homo sapiens


Alignment Length:209 Identity:51/209 - (24%)
Similarity:97/209 - (46%) Gaps:11/209 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YNGGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTDILTVRDRLMFR 70
            :|||.::|:.|:|...:|:|.|........:.|..|.:.:..:..:|.:|...|.||:...:..|
Human    35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEAR 99

  Fly    71 KNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPKTMEPFICNMDLIGCPNAPDD 135
            ..:|:...|:.|.....:||:|:.||..||.||::..::.|||.:. :..:.:.|.:|.... |.
Human   100 LKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEG-KGAVYSFDPVGSYQR-DS 162

  Fly   136 FVVAGTCAEQL---------YGMCETLWKPDLEPDQLFEVIAQSIVNAFDRDAMSGWGATVYIIE 191
            |...|:.:..|         :...:.:....|..|:...::....::|.:||..:|....:.|:.
Human   163 FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVT 227

  Fly   192 KDKITERTLKTRMD 205
            |:.|.|.|:..|.|
Human   228 KEGIREETVSLRKD 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 49/203 (24%)
PSMB1NP_002784.1 proteasome_beta_type_1 30..241 CDD:239726 50/207 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D435362at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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