DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta3 and PSMA6

DIOPT Version :10

Sequence 1:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_002782.1 Gene:PSMA6 / 5687 HGNCID:9535 Length:246 Species:Homo sapiens


Alignment Length:136 Identity:36/136 - (26%)
Similarity:53/136 - (38%) Gaps:43/136 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GGCV-VAMRGKDCVAIATDHRFG---IQAQTISTDFKKVFHIGPRMFLGLTGLQTDILTVRDRLM 68
            ||.. ||:|||||..|.|..:..   :.:.|::..||...:||..|    ||:..|     .|..
Human    35 GGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVM----TGMTAD-----SRSQ 90

  Fly    69 FRKNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPV------VAGLDP-----KTMEPFIC 122
            .::..||...                 :::::| |.| ||      :|.:..     ..|.|..|
Human    91 VQRARYEAAN-----------------WKYKYG-YEI-PVDMLCKRIADISQVYTQNAEMRPLGC 136

  Fly   123 NMDLIG 128
            .|.|||
Human   137 CMILIG 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 36/136 (26%)
PSMA6NP_002782.1 proteasome_alpha_type_6 8..220 CDD:239723 36/136 (26%)

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