DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta3 and PSMA5

DIOPT Version :10

Sequence 1:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_002781.2 Gene:PSMA5 / 5686 HGNCID:9534 Length:241 Species:Homo sapiens


Alignment Length:180 Identity:32/180 - (17%)
Similarity:67/180 - (37%) Gaps:28/180 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTDILTVRDRLMFRKN 72
            |...:.::..:.|.:|.:.|........|: .:|:..|...:...::||..|..|:.|:......
Human    34 GSTAIGIQTSEGVCLAVEKRITSPLMEPSS-IEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQ 97

  Fly    73 LYETRENREMCPKPFSAMMSSFLYEHRFG-----------PYFIEPVVAGLDPKTMEPFICNMD- 125
            .:....|..|..:..:..:|:...:  ||           |:.:..:..|:|.|  .|.:.:|| 
Human    98 NHWFTYNETMTVESVTQAVSNLALQ--FGEEDADPGAMSRPFGVALLFGGVDEK--GPQLFHMDP 158

  Fly   126 ---LIGCPNAPDDFVVAGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIV 172
               .:.|     |....|:.:|......:.::...:   .|.|.|..|::
Human   159 SGTFVQC-----DARAIGSASEGAQSSLQEVYHKSM---TLKEAIKSSLI 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 32/180 (18%)
PSMA5NP_002781.2 proteasome_alpha_type_5 8..220 CDD:239722 32/180 (18%)

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