DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta3 and PSMA3

DIOPT Version :9

Sequence 1:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_002779.1 Gene:PSMA3 / 5684 HGNCID:9532 Length:255 Species:Homo sapiens


Alignment Length:223 Identity:43/223 - (19%)
Similarity:77/223 - (34%) Gaps:70/223 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NGGCVVAMRGKDCVAIATDHRFGIQAQTISTDF-----KKVFHIGPRMFLGLTGLQTDILTVRD- 65
            |....:.:|.||.|.      ||::...:|..:     |::|::...:.:.:.||..|..::.| 
Human    33 NSSTAIGIRCKDGVV------FGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADI 91

  Fly    66 ----RLMFRKNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPKTMEPFICNMDL 126
                ...||.|.......:.:..:       ..:|.|.:..|           ..:.||.|:. :
Human    92 AREEASNFRSNFGYNIPLKHLADR-------VAMYVHAYTLY-----------SAVRPFGCSF-M 137

  Fly   127 IGCPNAPDDFVVAGTCAEQLY-----GMCETLW-----------KPDLEPDQLFEVIAQSIVNAF 175
            :|..:..|        ..|||     |:....|           |.::|..|:.|:..:.||...
Human   138 LGSYSVND--------GAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDIVKEV 194

  Fly   176 DRDAMSGWGATVYIIE---KDKITERTL 200
            .:        .:||:.   |||..|..|
Human   195 AK--------IIYIVHDEVKDKAFELEL 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 43/223 (19%)
PSMA3NP_002779.1 proteasome_alpha_type_3 5..217 CDD:239720 43/223 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.