DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta3 and PSMA3

DIOPT Version :10

Sequence 1:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_002779.1 Gene:PSMA3 / 5684 HGNCID:9532 Length:255 Species:Homo sapiens


Alignment Length:223 Identity:43/223 - (19%)
Similarity:77/223 - (34%) Gaps:70/223 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NGGCVVAMRGKDCVAIATDHRFGIQAQTISTDF-----KKVFHIGPRMFLGLTGLQTDILTVRD- 65
            |....:.:|.||.|.      ||::...:|..:     |::|::...:.:.:.||..|..::.| 
Human    33 NSSTAIGIRCKDGVV------FGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADI 91

  Fly    66 ----RLMFRKNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPKTMEPFICNMDL 126
                ...||.|.......:.:..:       ..:|.|.:..|           ..:.||.|:. :
Human    92 AREEASNFRSNFGYNIPLKHLADR-------VAMYVHAYTLY-----------SAVRPFGCSF-M 137

  Fly   127 IGCPNAPDDFVVAGTCAEQLY-----GMCETLW-----------KPDLEPDQLFEVIAQSIVNAF 175
            :|..:..|        ..|||     |:....|           |.::|..|:.|:..:.||...
Human   138 LGSYSVND--------GAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDIVKEV 194

  Fly   176 DRDAMSGWGATVYIIE---KDKITERTL 200
            .:        .:||:.   |||..|..|
Human   195 AK--------IIYIVHDEVKDKAFELEL 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 43/223 (19%)
PSMA3NP_002779.1 proteasome_alpha_type_3 5..217 CDD:239720 43/223 (19%)

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