DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta3 and psma5

DIOPT Version :9

Sequence 1:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_991271.1 Gene:psma5 / 403011 ZFINID:ZDB-GENE-040625-96 Length:241 Species:Danio rerio


Alignment Length:211 Identity:37/211 - (17%)
Similarity:82/211 - (38%) Gaps:29/211 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTDILTVRDRLMFRKN 72
            |...:.::..:.|.:|.:.|........|: .:|:..|...:...::||..|..|:.|:......
Zfish    34 GSTAIGIQTSEGVCLAVEKRITSPLMEPSS-IEKIVEIDSHIGCAMSGLIADAKTLIDKARVETQ 97

  Fly    73 LYETRENREMCPKPFSAMMSSFLYEHRFG-----------PYFIEPVVAGLDPK-----TMEP-- 119
            .:....|..|..:..:..:|:...:  ||           |:.:..:..|:|.|     .|:|  
Zfish    98 NHWFTYNETMTVESVTQAVSNLALQ--FGEEDADPGAMSRPFGVALLFGGVDEKGPQLYHMDPSG 160

  Fly   120 -FI-CNMDLIGCPNAPDDFVVAGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAFDRD-AMS 181
             |: |:...||..:..     |.:..:::|....||.........:.:.:.:..:||.:.: |..
Zfish   161 TFVQCDARAIGSASEG-----AQSSLQEVYHKSMTLKDAIKSSLTILKQVMEEKLNATNIELATV 220

  Fly   182 GWGATVYIIEKDKITE 197
            ..|.|.::..|:::.:
Zfish   221 EPGKTFHMYTKEELED 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 37/211 (18%)
psma5NP_991271.1 proteasome_alpha_type_5 8..220 CDD:239722 34/193 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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