DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta3 and Prosbeta2

DIOPT Version :9

Sequence 1:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_524076.2 Gene:Prosbeta2 / 39628 FlyBaseID:FBgn0023174 Length:272 Species:Drosophila melanogaster


Alignment Length:192 Identity:40/192 - (20%)
Similarity:82/192 - (42%) Gaps:12/192 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GGCVVAMRGKDCVAIATDHRFGIQAQTIS-TDFKKVFHIGPRMFLGLTGLQTDILTVRDRLMFRK 71
            |..:|.:..||.|.:..|.| ..:...:| .:..|:.::...::....|...|.....|.:..:.
  Fly    39 GTTIVGIIYKDGVILGADTR-ATEGPIVSDKNCAKIHYLAKNIYCCGAGTAADTEMTTDLISSQL 102

  Fly    72 NLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPKTMEPFICNMDLIGCPNAPDD- 135
            .|:..:.:||:.....:.|:...|:.:: |......|:.|:| || .|.|.::.    |:...| 
  Fly   103 ELHRLQTDREVRVVAANTMLKQMLFRYQ-GHISAALVLGGVD-KT-GPHIYSIH----PHGSSDK 160

  Fly   136 --FVVAGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAFDRDAMSGWGATVYIIEKDKI 195
              :...|:.:.....:.|:.|||||..::..:::..:|.:....|..||....:.:|.|..:
  Fly   161 LPYATMGSGSLAAMTVFESRWKPDLSEEEGKKLVRDAIASGVFNDLGSGSNIDLCVIRKGSV 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 40/192 (21%)
Prosbeta2NP_524076.2 PRE1 42..232 CDD:223711 39/189 (21%)
proteasome_beta_type_7 42..228 CDD:239732 39/189 (21%)
Pr_beta_C 232..264 CDD:289249
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441153
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11599
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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