DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta3 and Prosbeta2

DIOPT Version :10

Sequence 1:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_524076.2 Gene:Prosbeta2 / 39628 FlyBaseID:FBgn0023174 Length:272 Species:Drosophila melanogaster


Alignment Length:192 Identity:40/192 - (20%)
Similarity:82/192 - (42%) Gaps:12/192 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GGCVVAMRGKDCVAIATDHRFGIQAQTIS-TDFKKVFHIGPRMFLGLTGLQTDILTVRDRLMFRK 71
            |..:|.:..||.|.:..|.| ..:...:| .:..|:.::...::....|...|.....|.:..:.
  Fly    39 GTTIVGIIYKDGVILGADTR-ATEGPIVSDKNCAKIHYLAKNIYCCGAGTAADTEMTTDLISSQL 102

  Fly    72 NLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPKTMEPFICNMDLIGCPNAPDD- 135
            .|:..:.:||:.....:.|:...|:.:: |......|:.|:| || .|.|.::.    |:...| 
  Fly   103 ELHRLQTDREVRVVAANTMLKQMLFRYQ-GHISAALVLGGVD-KT-GPHIYSIH----PHGSSDK 160

  Fly   136 --FVVAGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAFDRDAMSGWGATVYIIEKDKI 195
              :...|:.:.....:.|:.|||||..::..:::..:|.:....|..||....:.:|.|..:
  Fly   161 LPYATMGSGSLAAMTVFESRWKPDLSEEEGKKLVRDAIASGVFNDLGSGSNIDLCVIRKGSV 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 40/192 (21%)
Prosbeta2NP_524076.2 proteasome_beta_type_7 42..228 CDD:239732 39/189 (21%)
Pr_beta_C 231..264 CDD:463597
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.