DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta3 and Prosalpha6T

DIOPT Version :10

Sequence 1:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_609623.1 Gene:Prosalpha6T / 34726 FlyBaseID:FBgn0032492 Length:289 Species:Drosophila melanogaster


Alignment Length:204 Identity:43/204 - (21%)
Similarity:69/204 - (33%) Gaps:36/204 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTDILTVRDRLMFRKN 72
            |...|.::|.|...:|...|......|:.   :|:..:...:.:.:.||..|...|...:.....
  Fly    32 GAATVGLKGTDYAVLAALCRTSKDTNTLQ---RKIMPVDDHVGMSIAGLTADARVVCQYMRTECM 93

  Fly    73 LYETRENREMCPKPFSAMMSSF---------LYEHRFGPYFIEPVVAGLDPK---------TMEP 119
            .|....|.|.   |...::|:.         .|:.|  ||.:..:|||.|.:         |...
  Fly    94 AYRHSYNAEF---PVRRLVSNLGNKLQTTTQRYDRR--PYGVGLLVAGYDEQGPHIYQVMPTANV 153

  Fly   120 FICNMDLIGCPNAPDDFVVAGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAFDRDAMSGWG 184
            ..|....||..:..     |.|..|:.....|     |.:.|:|.....|:|..:...|.:....
  Fly   154 LNCKAMAIGSRSQS-----ARTYLERNMESFE-----DCDMDELICHAIQAIRGSLGSDDVENLT 208

  Fly   185 ATVYIIEKD 193
            ..|.|:.||
  Fly   209 INVAIVGKD 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 43/204 (21%)
Prosalpha6TNP_609623.1 proteasome_alpha_type_1 6..215 CDD:239718 41/200 (21%)

Return to query results.
Submit another query.