DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta3 and Prosbeta4R1

DIOPT Version :10

Sequence 1:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_608698.2 Gene:Prosbeta4R1 / 33449 FlyBaseID:FBgn0031442 Length:215 Species:Drosophila melanogaster


Alignment Length:195 Identity:36/195 - (18%)
Similarity:80/195 - (41%) Gaps:16/195 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTDILTVRDRLMFRKNLYE 75
            ::.::|.|.:.:|:|......|..:..:.:|...|.....:...|...|.|...|.::...:||:
  Fly     4 ILGVKGTDFIILASDTMRNKSAMWLDDEVRKTHRISDYCMMSTAGDGGDCLKFSDFILRNMDLYK 68

  Fly    76 TRENREM--------CPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPKTMEPFICNMDLIGCPNA 132
            .....::        ..:..||.:.|..      .:.:..:|.|.| .|..|.:..:|.:| .:.
  Fly    69 ITNGYDLTVRGAVHFIRRHLSAYLKSDC------TFQVSLLVGGYD-LTSGPELHYIDYLG-NSV 125

  Fly   133 PDDFVVAGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAFDRDAMSGWGATVYIIEKDKITE 197
            |..:...|........:.|..:|||::....::||.:.::..:.|..::.....:::|.|:.||:
  Fly   126 PVRYGGHGAAMNFCTPILEEFYKPDMDTQAAYDVIKKCVIELYKRFVINLRNIDLFLISKNGITK 190

  Fly   198  197
              Fly   191  190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 36/195 (18%)
Prosbeta4R1NP_608698.2 proteasome_beta_type_2 1..193 CDD:239727 36/195 (18%)

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