DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta3 and Prosalpha4

DIOPT Version :10

Sequence 1:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_525092.1 Gene:Prosalpha4 / 32584 FlyBaseID:FBgn0004066 Length:249 Species:Drosophila melanogaster


Alignment Length:115 Identity:21/115 - (18%)
Similarity:43/115 - (37%) Gaps:15/115 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTDILTVRDRLMFRKN 72
            |...|.:||.:||.:..:.:...|.|. ....:|:..:...:.:...||..|.     |:|..:.
  Fly    31 GSTAVGVRGANCVVLGVEKKSVAQLQE-DRKVRKICMLDNHVVMAFAGLTADA-----RIMINRA 89

  Fly    73 LYETRENR---------EMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLD 113
            ..|.:.:|         |...:..:.:...:...:...|:.|..::.|.|
  Fly    90 QVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNGRRPFGISCLIGGFD 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 21/115 (18%)
Prosalpha4NP_525092.1 proteasome_alpha_type_7 5..213 CDD:239724 21/115 (18%)

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