DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta3 and Prosbeta5R2

DIOPT Version :9

Sequence 1:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_001286022.1 Gene:Prosbeta5R2 / 318924 FlyBaseID:FBgn0051742 Length:279 Species:Drosophila melanogaster


Alignment Length:188 Identity:39/188 - (20%)
Similarity:83/188 - (44%) Gaps:15/188 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YNGGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTDILTVRDRLMFR 70
            |.||.::.:..:     ||..:. |.:|:|    .||..:. :..:|.|.......|..||.:.|
  Fly    79 YQGGIILCVDSR-----ATSGKL-IGSQSI----HKVVQVN-QYIMGTTAGGAADCTYWDRALTR 132

  Fly    71 K-NLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPKTMEPFICNMDLIGCPNAPD 134
            : .|:|.|....:..:..:..:|:...|::.....:..::||..|:  .|.:..:|..|......
  Fly   133 ECRLHELRYKERLPVQSAAKYISNVAAEYKGMGLCMGMMLAGWSPE--GPSLVYVDSNGLRIHGK 195

  Fly   135 DFVVAGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAFDRDAMSGWGATVYIIEK 192
            .|.| |:.|....|:.::.::.||..::.:::...::.:|...|..||....:|.:::
  Fly   196 LFAV-GSGAPNALGILDSDYRLDLSDNEAYDLAFLAVYHATMTDIFSGGVVRLYHMDQ 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 39/188 (21%)
Prosbeta5R2NP_001286022.1 PTZ00488 46..279 CDD:185666 39/188 (21%)
proteasome_beta_type_5 72..259 CDD:239730 39/188 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440945
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11599
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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