DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta3 and Psmb3

DIOPT Version :10

Sequence 1:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_058981.1 Gene:Psmb3 / 29676 RGDID:61875 Length:205 Species:Rattus norvegicus


Alignment Length:205 Identity:128/205 - (62%)
Similarity:170/205 - (82%) Gaps:0/205 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSILAYNGGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTDILTVRD 65
            ||:::||||.|:||:||:|||||.|.|||||||.::|||:|:|.:|.|:::||.||.||:.||..
  Rat     1 MSVMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQ 65

  Fly    66 RLMFRKNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPKTMEPFICNMDLIGCP 130
            ||.||.||||.:|.|::.|....:|:::.|||.|||||:.|||:|||||||.:||||::||||||
  Rat    66 RLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDLIGCP 130

  Fly   131 NAPDDFVVAGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAFDRDAMSGWGATVYIIEKDKI 195
            ...|||||:|||:||:|||||:||:|:::|:.|||.|:|:::||.||||:||.|..|:|||||||
  Rat   131 MVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGMGVIVHIIEKDKI 195

  Fly   196 TERTLKTRMD 205
            |.||||.|||
  Rat   196 TTRTLKARMD 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 121/194 (62%)
Psmb3NP_058981.1 proteasome_beta_type_3 6..201 CDD:239728 121/194 (62%)

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