DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta3 and pup3

DIOPT Version :9

Sequence 1:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_587985.1 Gene:pup3 / 2539401 PomBaseID:SPCC63.12c Length:204 Species:Schizosaccharomyces pombe


Alignment Length:205 Identity:109/205 - (53%)
Similarity:150/205 - (73%) Gaps:1/205 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSILAYNGGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTDILTVRD 65
            |||:.||||..|||.||:|||||:|.|.|:|:.:::.:|.|||.:|.:.:||||||.||:.|:.:
pombe     1 MSIMEYNGGSCVAMAGKNCVAIASDLRLGVQSISLTNNFPKVFAMGDKTYLGLTGLATDVQTLYE 65

  Fly    66 RLMFRKNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPKTMEPFICNMDLIGCP 130
            ...::.|||:.||.|::.||.|:.::||.|||.||||||..|||||:. ....||||..|.|||.
pombe    66 LFRYKVNLYKFREERQIQPKTFANLVSSTLYEKRFGPYFSFPVVAGVS-NDNTPFICGFDSIGCI 129

  Fly   131 NAPDDFVVAGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAFDRDAMSGWGATVYIIEKDKI 195
            :..:||:|:||..||||||||::::|:||||.|||.|:|:::||.|||.:||||..||:|..||.
pombe   130 DFAEDFIVSGTATEQLYGMCESVYEPNLEPDDLFETISQALLNAQDRDCISGWGCVVYVITADKC 194

  Fly   196 TERTLKTRMD 205
            .:|.:|.|.|
pombe   195 IKRLVKGRQD 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 103/194 (53%)
pup3NP_587985.1 PRE1 3..200 CDD:223711 104/197 (53%)
proteasome_beta_type_3 6..200 CDD:239728 103/194 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 210 1.000 Domainoid score I606
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2089
Inparanoid 1 1.050 228 1.000 Inparanoid score I868
OMA 1 1.010 - - QHG53924
OrthoFinder 1 1.000 - - FOG0003566
OrthoInspector 1 1.000 - - oto100461
orthoMCL 1 0.900 - - OOG6_101970
Panther 1 1.100 - - LDO PTHR11599
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1011
SonicParanoid 1 1.000 - - X2440
TreeFam 1 0.960 - -
1413.860

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