DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta3 and pup3

DIOPT Version :10

Sequence 1:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_587985.1 Gene:pup3 / 2539401 PomBaseID:SPCC63.12C Length:204 Species:Schizosaccharomyces pombe


Alignment Length:205 Identity:109/205 - (53%)
Similarity:150/205 - (73%) Gaps:1/205 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSILAYNGGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTDILTVRD 65
            |||:.||||..|||.||:|||||:|.|.|:|:.:::.:|.|||.:|.:.:||||||.||:.|:.:
pombe     1 MSIMEYNGGSCVAMAGKNCVAIASDLRLGVQSISLTNNFPKVFAMGDKTYLGLTGLATDVQTLYE 65

  Fly    66 RLMFRKNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPKTMEPFICNMDLIGCP 130
            ...::.|||:.||.|::.||.|:.::||.|||.||||||..|||||:. ....||||..|.|||.
pombe    66 LFRYKVNLYKFREERQIQPKTFANLVSSTLYEKRFGPYFSFPVVAGVS-NDNTPFICGFDSIGCI 129

  Fly   131 NAPDDFVVAGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAFDRDAMSGWGATVYIIEKDKI 195
            :..:||:|:||..||||||||::::|:||||.|||.|:|:::||.|||.:||||..||:|..||.
pombe   130 DFAEDFIVSGTATEQLYGMCESVYEPNLEPDDLFETISQALLNAQDRDCISGWGCVVYVITADKC 194

  Fly   196 TERTLKTRMD 205
            .:|.:|.|.|
pombe   195 IKRLVKGRQD 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 103/194 (53%)
pup3NP_587985.1 proteasome_beta_type_3 6..200 CDD:239728 103/194 (53%)

Return to query results.
Submit another query.