DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta3 and Psmb1

DIOPT Version :10

Sequence 1:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_035315.1 Gene:Psmb1 / 19170 MGIID:104884 Length:240 Species:Mus musculus


Alignment Length:210 Identity:53/210 - (25%)
Similarity:98/210 - (46%) Gaps:11/210 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AYNGGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTDILTVRDRLMF 69
            |:|||.|:|:.|:|...:|:|.|........:.|..|.:.:..:..:|.:|...|.||:...:..
Mouse    33 AFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEA 97

  Fly    70 RKNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPKTMEPFICNMDLIGCPNAPD 134
            |..:|:...|:.|.....:||:|:.||..||.||::..::.|||.:. :..:.:.|.:|.... |
Mouse    98 RLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEG-KGAVYSFDPVGSYQR-D 160

  Fly   135 DFVVAGTCAEQL---------YGMCETLWKPDLEPDQLFEVIAQSIVNAFDRDAMSGWGATVYII 190
            .|...|:.:..|         :...:.:....|..|:...::....::|.:||..:|....:.|:
Mouse   161 SFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKDVFISAAERDVYTGDALRICIV 225

  Fly   191 EKDKITERTLKTRMD 205
            .|:.|.|.|:..|.|
Mouse   226 TKEGIREETVPLRKD 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 50/203 (25%)
Psmb1NP_035315.1 proteasome_beta_type_1 29..240 CDD:239726 52/208 (25%)

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