DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta3 and Psma3

DIOPT Version :10

Sequence 1:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_035314.3 Gene:Psma3 / 19167 MGIID:104883 Length:255 Species:Mus musculus


Alignment Length:223 Identity:44/223 - (19%)
Similarity:77/223 - (34%) Gaps:70/223 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NGGCVVAMRGKDCVAIATDHRFGIQAQTISTDF-----KKVFHIGPRMFLGLTGLQTDILTVRD- 65
            |....:.:|.||.|.      ||::...:|..:     |::|::...:.:.:.||..|..::.| 
Mouse    33 NSSTAIGIRCKDGVV------FGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADI 91

  Fly    66 ----RLMFRKNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPKTMEPFICNMDL 126
                ...||.|.......:.:..:       ..:|.|.:..|           ..:.||.|:. :
Mouse    92 AREEASNFRSNFGYNIPLKHLADR-------VAMYVHAYTLY-----------SAVRPFGCSF-M 137

  Fly   127 IGCPNAPDDFVVAGTCAEQLY-----GMCETLW-----------KPDLEPDQLFEVIAQSIVNAF 175
            :|..:|.|        ..|||     |:....|           |.::|..|:.|:..       
Mouse   138 LGSYSAND--------GAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTC------- 187

  Fly   176 DRDAMSGWGATVYIIE---KDKITERTL 200
             ||.:......:||:.   |||..|..|
Mouse   188 -RDVVKEVAKIIYIVHDEVKDKAFELEL 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 44/223 (20%)
Psma3NP_035314.3 proteasome_alpha_type_3 5..217 CDD:239720 44/223 (20%)

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