DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta3 and pas-6

DIOPT Version :9

Sequence 1:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_504472.1 Gene:pas-6 / 178943 WormBaseID:WBGene00003927 Length:260 Species:Caenorhabditis elegans


Alignment Length:44 Identity:11/44 - (25%)
Similarity:20/44 - (45%) Gaps:13/44 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GIQAQT-------------ISTDFKKVFHIGPRMFLGLTGLQTD 59
            ||:::|             :|:..|||:.|.....:.:.||.:|
 Worm    37 GIKSETHAVIVALKRAQNDLSSHQKKVYEIDTHAGVSIAGLLSD 80

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 11/44 (25%)
pas-6NP_504472.1 PRE1 4..237 CDD:223711 11/44 (25%)
proteasome_alpha_type_1 6..216 CDD:239718 11/44 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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