DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta3 and pbs-5

DIOPT Version :9

Sequence 1:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_493558.1 Gene:pbs-5 / 173334 WormBaseID:WBGene00003951 Length:284 Species:Caenorhabditis elegans


Alignment Length:174 Identity:44/174 - (25%)
Similarity:72/174 - (41%) Gaps:19/174 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTDILTVRDRLMFRK-NLYETRENR 80
            |..:.:|.|.|........|....|:..||.||...:.|...| .....|::.:. .|||.||..
 Worm    80 KGGIIVAVDSRASSGEYISSKSVMKILDIGDRMVATMAGGAAD-CQFWTRIVAKYCTLYELREKT 143

  Fly    81 EMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPKTMEPFICNMDLIG-------CPNAPDDFVV 138
            .:.....|...::.||.:|.....:..:|||.|.|  .|.|..:|..|       |.        
 Worm   144 SITVSAASKYFANTLYGYRGQGLSVGSMVAGYDKK--GPQIFKVDSEGDRCQLKVCS-------- 198

  Fly   139 AGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAFDRDAMSG 182
            .|:.:...||:.:..:||.:..|:..::..::|::|..||:.||
 Worm   199 VGSGSLNAYGILDNHYKPKMTDDEARKLGLRAIMHATYRDSGSG 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 44/174 (25%)
pbs-5NP_493558.1 Ntn_hydrolase 65..252 CDD:320988 44/174 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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