DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta3 and pas-5

DIOPT Version :10

Sequence 1:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_492765.1 Gene:pas-5 / 172942 WormBaseID:WBGene00003926 Length:248 Species:Caenorhabditis elegans


Alignment Length:123 Identity:19/123 - (15%)
Similarity:49/123 - (39%) Gaps:13/123 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTDILTVRDRLMFRKN 72
            |...:.::..:.|.:|.:.| ......::...:|:..:...:.:...||..|..|:.:|......
 Worm    34 GSTSIGIKTSEGVLLAAEKR-STSKLMVNDAIEKISKVDQHIGVTFAGLIADSRTLVERAQIEAQ 97

  Fly    73 LYETRENREMCPKPFSAMMSSFLYEHRFG----------PYFIEPVVAGLDPKTMEPF 120
            .:....||::..:..:..:::...:  ||          |:.:..:.||:|.:..:.|
 Worm    98 NFWFTYNRKIRVEDVTQSVANLALQ--FGDDDVKASMSRPFGVAMLFAGVDQEGAKLF 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 19/123 (15%)
pas-5NP_492765.1 proteasome_alpha_type_5 8..219 CDD:239722 19/123 (15%)

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