DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11977 and AT1G50060

DIOPT Version :9

Sequence 1:NP_649855.3 Gene:CG11977 / 41076 FlyBaseID:FBgn0037650 Length:274 Species:Drosophila melanogaster
Sequence 2:NP_175428.1 Gene:AT1G50060 / 841430 AraportID:AT1G50060 Length:161 Species:Arabidopsis thaliana


Alignment Length:133 Identity:32/133 - (24%)
Similarity:58/133 - (43%) Gaps:24/133 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 NLPRA-VKFKNIKWDDELSVMAMRVSN----QC-LQHTFSPCVNTFLYKDVGESSDFVKVQNTSK 159
            |..|| |...|:.||..|:..|:..||    .| |.|:..|         .||:    ..:.:|.
plant    35 NTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLVHSNGP---------YGEN----LAKGSSS 86

  Fly   160 GFNVISFLNMWFEYHKMMKPSYVNNFPNIAPQDRLIIFANLIYEKNKKMGCGMVK-SGQGRFLTC 223
            .|:.||.:.:|.:    .||.|...:.|.....:.:.:..:::..:.|:||..|: :....|::|
plant    87 SFSAISAVKLWVD----EKPYYSYAYNNCTGGKQCLHYTQVVWRDSVKIGCARVQCTNTWWFVSC 147

  Fly   224 LFD 226
            .::
plant   148 NYN 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11977NP_649855.3 SCP_euk 81..226 CDD:240180 32/131 (24%)
AT1G50060NP_175428.1 CAP_PR-1 27..161 CDD:349400 32/133 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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