DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11977 and r3hdml

DIOPT Version :9

Sequence 1:NP_649855.3 Gene:CG11977 / 41076 FlyBaseID:FBgn0037650 Length:274 Species:Drosophila melanogaster
Sequence 2:NP_001373427.1 Gene:r3hdml / 561976 ZFINID:ZDB-GENE-090313-275 Length:252 Species:Danio rerio


Alignment Length:145 Identity:28/145 - (19%)
Similarity:55/145 - (37%) Gaps:36/145 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 PRAVKFKNIKWDDELSVMAMRVSNQCL----QHTFSPCVNTFLYKDVGESSDFVKVQNTSKGFNV 163
            |.|...:.:.||:.|:..|...::||:    .|.|        .:.:|::...:..:..|    :
Zfish    82 PPAANMEYMVWDERLAKSAEFWASQCIWEHGPHHF--------LQHIGQNLSIISGRYKS----I 134

  Fly   164 ISFLNMWF-EYHKMMKPSYVNNFPNIAPQDRLIIFANLIYEKNKKMGCGMVKSG----------Q 217
            |..:..|: |.|....||..:.  ::...     :..:::..:.|:||.:.|..          |
Zfish   135 IDLVKSWYDERHSFSYPSRCSG--SVCTH-----YTQMVWAASNKIGCAIKKCSDIFVFGSMWKQ 192

  Fly   218 GRFLTCLFDKKIKPN 232
            ...|.|.:  .||.|
Zfish   193 ATLLVCNY--AIKGN 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11977NP_649855.3 SCP_euk 81..226 CDD:240180 25/137 (18%)
r3hdmlNP_001373427.1 CAP_R3HDML 66..201 CDD:349409 25/139 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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