DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11977 and Glipr1l3

DIOPT Version :9

Sequence 1:NP_649855.3 Gene:CG11977 / 41076 FlyBaseID:FBgn0037650 Length:274 Species:Drosophila melanogaster
Sequence 2:NP_001360960.1 Gene:Glipr1l3 / 544736 MGIID:3620621 Length:236 Species:Mus musculus


Alignment Length:195 Identity:43/195 - (22%)
Similarity:77/195 - (39%) Gaps:48/195 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 DIVRNVNN-FRRKLEWGLGNLPRAVKFKNIKWDDELSVMAMRVSNQC-LQHTFSPCVN-----TF 140
            |...|::| .|||::      |.|.....:.||.:|:.:|...:.:| |.|  :||.:     ..
Mouse    43 DAFLNIHNELRRKVQ------PPAADMNQVIWDQKLAKLAKAWTRECKLGH--NPCTSKQYGCLL 99

  Fly   141 LYKDVGESSDFVKVQNTSKGFNVISFLNMWFEYHKMMKPSYVNNFPNIAPQDRLIIFANLIYEKN 205
            .|..:||:....:::...:     ..:|.|  |::....::|:|..:...::    :..|::.|.
Mouse   100 DYDFIGENIYLGEIETQPE-----DVVNNW--YNENTDYNFVDNTCSKICRN----YTQLVWAKT 153

  Fly   206 KKMGCGMVK----------------SGQGRFLTCLFDKKIKP----NQKLYTTRLNDPFRTNRKT 250
            .|:||.:..                |..|.||.....:|..|    .|:.....|..|.  ||||
Mouse   154 FKIGCAVSNCPNLTRYSAGLFVCNYSPTGNFLDFRPYRKGDPCSMCGQRKCENSLCRPM--NRKT 216

  Fly   251  250
            Mouse   217  216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11977NP_649855.3 SCP_euk 81..226 CDD:240180 34/165 (21%)
Glipr1l3NP_001360960.1 CAP 40..182 CDD:381818 31/157 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.