DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11977 and Clec18a

DIOPT Version :9

Sequence 1:NP_649855.3 Gene:CG11977 / 41076 FlyBaseID:FBgn0037650 Length:274 Species:Drosophila melanogaster
Sequence 2:XP_030099497.1 Gene:Clec18a / 353287 MGIID:2672935 Length:615 Species:Mus musculus


Alignment Length:185 Identity:31/185 - (16%)
Similarity:59/185 - (31%) Gaps:51/185 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 NNFRRKLEWGLGNLPRAVKFKNIKWDDELSVMAMRVSNQCLQHTFSPCVNTFLYKDVGESSDFVK 153
            |..|.::.      |.|...:.:.|.:.|:.:|...:..|:........:|             .
Mouse   135 NRLRSRVH------PPAANMQRMDWSESLAQLAEARAALCVTSVTPNLAST-------------P 180

  Fly   154 VQNTSKGFNV----------ISFLNMWFEYHKMMKPSYVNNFPNIAPQDRLIIFANLIYEKNKKM 208
            ..|:..|:||          :..:|:||....    .|.:.....|.......:..|::..:.::
Mouse   181 GHNSHVGWNVQLMPMGSASFVEVVNLWFAEGL----QYRHGDAECAHNATCAHYTQLVWATSSQL 241

  Fly   209 GCG----MVKSGQGRFLTCLFD---------KKIKPNQK-----LYTTRLNDPFR 245
            |||    .|.........|.:.         |.:.|.:|     |.|.|::..|:
Mouse   242 GCGRQPCFVDQEAMEAFVCAYSPGGNWDINGKTVAPYKKGTWCSLCTARVSGCFK 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11977NP_649855.3 SCP_euk 81..226 CDD:240180 24/150 (16%)
Clec18aXP_030099497.1 CAP_euk 129..263 CDD:349399 24/150 (16%)
EGF_Lam 315..360 CDD:214543
CLECT 390..514 CDD:153057
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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