DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11977 and Pi15

DIOPT Version :9

Sequence 1:NP_649855.3 Gene:CG11977 / 41076 FlyBaseID:FBgn0037650 Length:274 Species:Drosophila melanogaster
Sequence 2:NP_001100387.1 Gene:Pi15 / 301489 RGDID:1309577 Length:258 Species:Rattus norvegicus


Alignment Length:226 Identity:38/226 - (16%)
Similarity:80/226 - (35%) Gaps:66/226 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IVIVAELKCHTGHTVFRTRWPTYVQKKHY-------NIPVKPPDYCNADICPANKKHITCGFKFW 64
            :||:..|.|.....|......:.:...::       ::||     .:.||..|.:|...      
  Rat     9 LVILLSLLCEARTIVLLNFTDSSLPANNFSDIEATLSVPV-----LSVDIPKARRKRYI------ 62

  Fly    65 STKCGRNHEGVRMSDYRYDIVRNVNNFRRKLEWGLGNLPRAVKFKNIKWDDELSVMAMRVSNQCL 129
                 ..::.:.:.||.       |..|.|:      .|.|...:.:.||:.|:..|...:..|:
  Rat    63 -----SQNDMIAILDYH-------NQVRGKV------FPPAANMEYMVWDENLAKSAEAWAATCI 109

  Fly   130 -QHTFSPCVNTFLYKDVGESSDFVKVQNTSKGFNVISFLNMWFEYHKMMKPSYVNNFPNIAPQD- 192
             .|  .|   ::|.:.:|::...    .|.:..:::..:..|::..|    .|.  ||  .||| 
  Rat   110 WDH--GP---SYLLRFLGQNLSV----RTGRYRSILQLVKPWYDEVK----DYA--FP--YPQDC 157

  Fly   193 -----------RLIIFANLIYEKNKKMGCGM 212
                       ....:..:::..:.::||.:
  Rat   158 NPRCPMRCFGPMCTHYTQMVWATSNRIGCAI 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11977NP_649855.3 SCP_euk 81..226 CDD:240180 25/145 (17%)
Pi15NP_001100387.1 SCP_euk 69..212 CDD:240180 27/150 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.