DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11977 and Pi16

DIOPT Version :9

Sequence 1:NP_649855.3 Gene:CG11977 / 41076 FlyBaseID:FBgn0037650 Length:274 Species:Drosophila melanogaster
Sequence 2:NP_001163952.1 Gene:Pi16 / 294312 RGDID:1304760 Length:483 Species:Rattus norvegicus


Alignment Length:171 Identity:36/171 - (21%)
Similarity:67/171 - (39%) Gaps:37/171 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 DYRYDIVRNVNNFRRKLEWGLGNLPRAVKFKNIKWDDELSVMAMRVSNQCL-QHTFSPCVNTFLY 142
            |.:..:|...|::|.::.      |.|.....::|||||:..|...:.:|: .|.          
  Rat    37 DEKQTMVELHNHYRAQVS------PPASDMLQMRWDDELAAFAKAYAQKCVWGHN---------- 85

  Fly   143 KDVGESSDFVKVQNTSKGFNVISFLNMWFEYHKMMKPSYVN-NFPNIAPQDRLIIFANLIYEKNK 206
            |:.|...:.: ...|.:|.:|...:..|.|.|:     |.| :.....|......:..:::.|.:
  Rat    86 KERGRRGENL-FAITDEGMDVPLAVGNWHEEHE-----YYNLSTATCDPGQMCGHYTQVVWSKTE 144

  Fly   207 KMGCGM--------VKSGQGRFLTCLFD-----KKIKPNQK 234
            ::|||.        |:......|.|.::     |..||.|:
  Rat   145 RIGCGSHFCETLQGVEEANIHLLVCNYEPPGNVKGRKPYQE 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11977NP_649855.3 SCP_euk 81..226 CDD:240180 31/154 (20%)
Pi16NP_001163952.1 SCP_HrTT-1 39..172 CDD:240186 31/154 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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