DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11977 and scl-18

DIOPT Version :9

Sequence 1:NP_649855.3 Gene:CG11977 / 41076 FlyBaseID:FBgn0037650 Length:274 Species:Drosophila melanogaster
Sequence 2:NP_502228.2 Gene:scl-18 / 188436 WormBaseID:WBGene00011724 Length:225 Species:Caenorhabditis elegans


Alignment Length:195 Identity:45/195 - (23%)
Similarity:69/195 - (35%) Gaps:51/195 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 ITCGFKFWSTKCGRNHEGVRMSDYR---YDIVRNVNNFRRKLEWGLGNLPRAVK------FKNIK 112
            ||.||........:.|:||.....|   .|::.:.||.|.:|.:|.....|..|      .|...
 Worm    11 ITRGFLLLFLTIVQLHKGVESIFSRKGQQDVLDHHNNIRSQLAFGNFVTKRHTKRAAGSNIKKFV 75

  Fly   113 WDD--ELSVMAMRVSNQCLQHTFSPCVNTFLYKDVGESSDFVKVQNTSKGFNVISFLNMWFEYHK 175
            |:.  |.|..:....|.. ||:|.|        |:||:. |.........||         :|..
 Worm    76 WNATLERSAYSFAQKNPS-QHSFIP--------DIGENL-FWHWSTRPGDFN---------KYGP 121

  Fly   176 MMKPSYVNNF------PNIAPQDRLIIFAN-------LIYEKNKKMGCGM-----VKSGQGRFLT 222
            |...|::..|      .||...|   :|.:       :::....:|||.:     :....||.:|
 Worm   122 MAALSWIKEFREKFWDSNILTND---LFGSGVGHATQMVWADTYQMGCAVSHFKEIHKRTGRPIT 183

  Fly   223  222
             Worm   184  183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11977NP_649855.3 SCP_euk 81..226 CDD:240180 38/171 (22%)
scl-18NP_502228.2 SCP 37..193 CDD:214553 37/169 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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