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Protein Alignment CG11977 and vap-1
DIOPT Version :9
Sequence 1: | NP_649855.3 |
Gene: | CG11977 / 41076 |
FlyBaseID: | FBgn0037650 |
Length: | 274 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001024553.1 |
Gene: | vap-1 / 181768 |
WormBaseID: | WBGene00006886 |
Length: | 424 |
Species: | Caenorhabditis elegans |
Alignment Length: | 146 |
Identity: | 32/146 - (21%) |
Similarity: | 49/146 - (33%) |
Gaps: | 18/146 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 89 NNFRRKLEWGL-----GNLPRAVKFKNIKWDDELSVMAMRVSNQCLQ--HTFSPCVNTFLYKDVG 146
|:.||.:..|| |.|........:.||.|:...|...::.|.. .||.|.........:|
Worm 41 NDARRSMAKGLEPNKCGLLSGGKNVYELNWDCEMEAKAQEWADGCPSSFQTFDPTWGQNYATYMG 105
Fly 147 ESSDFVKVQNTSKGFNVISFLNMWFEYHKMMKPSYVNNFPNIAPQDRLIIFANLIYEKNKKMGCG 211
..:| .:...|...| ..|.|...:......|.:.|.| :..|||:...|....||.
Worm 106 SIAD--PLPYASMAVN-----GWWSEIRTVGLTDPDNKYTNSA----MFRFANMANGKASAFGCA 159
Fly 212 MVKSGQGRFLTCLFDK 227
.........:.|:::|
Worm 160 YALCAGKLSINCIYNK 175
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG11977 | NP_649855.3 |
SCP_euk |
81..226 |
CDD:240180 |
31/143 (22%) |
vap-1 | NP_001024553.1 |
SCP |
31..175 |
CDD:214553 |
31/144 (22%) |
SCP |
234..386 |
CDD:214553 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1528782at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.920 |
|
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