DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11977 and lon-1

DIOPT Version :9

Sequence 1:NP_649855.3 Gene:CG11977 / 41076 FlyBaseID:FBgn0037650 Length:274 Species:Drosophila melanogaster
Sequence 2:NP_498166.1 Gene:lon-1 / 175753 WormBaseID:WBGene00003055 Length:312 Species:Caenorhabditis elegans


Alignment Length:134 Identity:29/134 - (21%)
Similarity:48/134 - (35%) Gaps:37/134 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 IVRNVNNFRRKLEWGLGNLPRAVKFKNIKWDDELSVMAMRVSNQC-LQHTFSPCVNTFLYKDVGE 147
            |....|.:||.:.        |.....:.|.|||:..|.|.::.| .:|:....       :|||
 Worm    84 ITHEHNRYRRMVP--------ASDMNMLYWSDELAASAQRHADTCDFRHSRGRI-------NVGE 133

  Fly   148 SSDFVKVQNTSKGFNVISFLNMWF-EYHKMMKPSYVNNFP----NIAPQDRLIIFANLIYEKNKK 207
            :.......|.|..      :::|| |.|.          |    |.|.:.....:..:::.|...
 Worm   134 NIWAAPYSNYSDA------ISIWFNEVHN----------PRCGCNHAYKHCCGHYVQVVWAKTNL 182

  Fly   208 MGCG 211
            :|||
 Worm   183 VGCG 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11977NP_649855.3 SCP_euk 81..226 CDD:240180 29/134 (22%)
lon-1NP_498166.1 SCP 81..211 CDD:214553 29/134 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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