DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11977 and Crispld2

DIOPT Version :9

Sequence 1:NP_649855.3 Gene:CG11977 / 41076 FlyBaseID:FBgn0037650 Length:274 Species:Drosophila melanogaster
Sequence 2:NP_612527.2 Gene:Crispld2 / 171547 RGDID:620860 Length:497 Species:Rattus norvegicus


Alignment Length:159 Identity:37/159 - (23%)
Similarity:60/159 - (37%) Gaps:43/159 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 HEGVR----MSDYRYDIVRNVNNFRRKLEWGLGNLPRAVKFKNIKWDDELSVMAMRVSNQCL-QH 131
            |..||    ||| |.:|:...|..|.::      .|.|...:.:.||:||...|...:.:|| :|
  Rat    44 HSRVRRAIPMSD-RQEILMLHNKLRGQV------YPPASNMEYMTWDEELERSAAAWAQRCLWEH 101

  Fly   132 TFSPCVNTFLYKDVGESSDFVKV-QN--------TSKGFNVISFLNMWFEYHKMMKPSYVNNFPN 187
                          |.:|..|.: ||        .|.||:|.|    |::..|.....|.:....
  Rat   102 --------------GPASLLVSIGQNLAVHWGRYRSPGFHVQS----WYDEVKDYTYPYPHECNP 148

  Fly   188 IAPQ----DRLIIFANLIYEKNKKMGCGM 212
            ..|:    .....:..:::....|:||.:
  Rat   149 WCPERCSGAMCTHYTQMVWATTNKIGCAV 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11977NP_649855.3 SCP_euk 81..226 CDD:240180 31/146 (21%)
Crispld2NP_612527.2 SCP_euk 56..201 CDD:240180 31/146 (21%)
LCCL 286..370 CDD:128866
LCCL 389..487 CDD:281766
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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