DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11977 and crispld2

DIOPT Version :9

Sequence 1:NP_649855.3 Gene:CG11977 / 41076 FlyBaseID:FBgn0037650 Length:274 Species:Drosophila melanogaster
Sequence 2:XP_003199065.1 Gene:crispld2 / 100535149 ZFINID:ZDB-GENE-130131-1 Length:508 Species:Danio rerio


Alignment Length:147 Identity:30/147 - (20%)
Similarity:55/147 - (37%) Gaps:19/147 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 RNHEGVRMSDYRYDIVRNVNNFRRKLEWGLGNLPRAVKFKNIKWDDELSVMAMRVSNQCLQHTFS 134
            |....:..|| |.:|::..|..|.::      .|.|...:.:.|||||...|...:.|| |....
Zfish    51 RTRRAIEWSD-REEILKLHNKLRGEV------YPTASNMEYMIWDDELERSATSWAEQC-QWEHG 107

  Fly   135 PCVNTFLYKDVGESSDFVKVQNTSKGFNVISFLNMWFEYHKMMKPSYVNNFPNIAPQ----DRLI 195
            |   ..|...:|::......:..|..::|    ..|::..|.....|.:......|:    ....
Zfish   108 P---QDLLMSIGQNLAVHWGRYRSPAYHV----QAWYDEVKDYTYPYPHECNPWCPERCSGPMCT 165

  Fly   196 IFANLIYEKNKKMGCGM 212
            .:..|::....::||.:
Zfish   166 HYTQLVWATTNRVGCAV 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11977NP_649855.3 SCP_euk 81..226 CDD:240180 27/136 (20%)
crispld2XP_003199065.1 SCP_euk 61..206 CDD:240180 27/136 (20%)
LCCL 299..382 CDD:128866
LCCL 402..495 CDD:281766
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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