DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31100 and VBA4

DIOPT Version :9

Sequence 1:NP_001262395.1 Gene:CG31100 / 41075 FlyBaseID:FBgn0051100 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_010404.1 Gene:VBA4 / 851697 SGDID:S000002526 Length:768 Species:Saccharomyces cerevisiae


Alignment Length:518 Identity:103/518 - (19%)
Similarity:174/518 - (33%) Gaps:197/518 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 SETSGDILLNKDEISWFSSIN-LICVPLGCLFSGLLTQPLGKRRAMQFVNLPILAAWLMFHFATR 148
            |...|.::..|  :|..||:. |:|:   ..||.:|...|               :|...||.| 
Yeast   296 SNAIGQLVFLK--LSLISSVKLLLCI---AQFSFILGGYL---------------SWSSAHFWT- 339

  Fly   149 TEHLYAALCLAGLGGG---LMEAPVLTYVAEITEPKYRGILSALGTTCVITGVFIQFILGSLMD- 209
               ...|.|:.|.|||   .:::.::...::..:.:|.  |||...|..: ||.|...:.:|.| 
Yeast   340 ---FIFARCVTGFGGGSLIALKSTIMNRFSQKNDSRYS--LSASMITFAM-GVVIGPFMMNLFDS 398

  Fly   210 -----WRSVAAVSSAFPVITI-IMLCFV----------PESPVWLIREQRFREA----------- 247
                 ||:...:...|.::.. |||..:          |...:|    :||:..           
Yeast   399 SHGSGWRNAFLIPVPFCLVNASIMLADMYSVKSTLYGRPTPTLW----KRFKNTLLSPDLYEILT 459

  Fly   248 ----------VKSLQWLRGWVPEHMIEAEFNQLYDELIT---------------QKAIELSADG- 286
                      |.||. |.|.....||:|   .|:..:|.               ...|.:|..| 
Yeast   460 LTLFLLCFVQVTSLD-LTGLKNNTMIQA---LLFSVIIVCGILFFLIETSDTYMNSVISMSLQGD 520

  Fly   287 -------------------IPPPG----------QRRTLGQRLR---------------MWRKR- 306
                               |.|.|          ....|.:||.               .|:.: 
Yeast   521 KRLIWTMIGISFCFAALMCIIPFGTTYFIIVLNLSTLQLAERLSPFFFSIVLGYFSVSYFWKSKG 585

  Fly   307 -SFLVPFLLVSFSFFTGHFSGKTPLQTYAVQIFHTLKAPMNKYHATI---LLGVAEMLATILGVV 367
             :||:.|:|          ||.| |..|...:..:|..|:.|.:..:   .|| :.|:.|:|..:
Yeast   586 QNFLLKFVL----------SGAT-LLLYVALMGVSLNLPVWKQYICLSLPFLG-SSMILTLLSNL 638

  Fly   368 L--IHFTGKRPL---------VLVSTVGTGLCFFGTATYAHFLSEVPGFTVNNVVVNA--SSIMP 419
            .  .|...|.|:         .:..|||..|               .|:..:..::..  ..:||
Yeast   639 YHEYHEQRKSPISGSIVYCFGAVGGTVGISL---------------GGYVFHKTLIKLMHEKVMP 688

  Fly   420 --KEGILSQQNISKIFETEQQA---IRQETERFTTQLPDIETTTLFDQEIYNRSRRDVVEMMT 477
              |:|.| ::::.||.:...::   :.:...:|..|       ||.  |.|.::.|:|.::.|
Yeast   689 FSKQGYL-KKDLLKIIKHATESSDWVHESAPKFVFQ-------TLI--ECYLQACRNVFKLST 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31100NP_001262395.1 MFS 59..>232 CDD:119392 38/167 (23%)
Sugar_tr 98..633 CDD:278511 100/505 (20%)
MFS <531..616 CDD:119392
VBA4NP_010404.1 MFS 259..>414 CDD:421695 34/144 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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