DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31100 and SNF3

DIOPT Version :9

Sequence 1:NP_001262395.1 Gene:CG31100 / 41075 FlyBaseID:FBgn0051100 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_010087.1 Gene:SNF3 / 851333 SGDID:S000002353 Length:884 Species:Saccharomyces cerevisiae


Alignment Length:683 Identity:124/683 - (18%)
Similarity:221/683 - (32%) Gaps:243/683 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 PLFMQNGNGGR------IATSDVEVSNFRRAL----PQ----FLAVSIKNILLFGYGMTLGFPTI 73
            |..:|..|..|      :.|.|:...:....|    ||    .:::.:...:..| |...|:.|.
Yeast    53 PTSLQRQNSDRQSNMTSVFTDDISTIDDNSILFSEPPQKQSMMMSICVGVFVAVG-GFLFGYDTG 116

  Fly    74 VIPAIQGGEGRSETSGDILLNKDEI-SWFSSINLICVPLGCLFSGLLTQPL-----GKRRAMQFV 132
            :|.:|   ...:.....:..|.|.. :...||.:..:.||..| |.||.|.     |::..:.|.
Yeast   117 LINSI---TSMNYVKSHVAPNHDSFTAQQMSILVSFLSLGTFF-GALTAPFISDSYGRKPTIIFS 177

  Fly   133 NLPILAAWLMFHF-ATRTEHLYAALCLAGLGGGLMEAPVLTYVAEITEPKYRGILSALGTTCVIT 196
            .:.|.:....... |.....|.....::|:|.|.:.|.|..|.||.|....||.:.:.....:..
Yeast   178 TIFIFSIGNSLQVGAGGITLLIVGRVISGIGIGAISAVVPLYQAEATHKSLRGAIISTYQWAITW 242

  Fly   197 GVFI-----------------QFILGSLMDWRSVAAVSSAFPVITIIMLCFVPESPVWLIREQRF 244
            |:.:                 :..:|....|.|..|:.          :.|:||||.:.:.:.:.
Yeast   243 GLLVSSAVSQGTHARNDASSYRIPIGLQYVWSSFLAIG----------MFFLPESPRYYVLKDKL 297

  Fly   245 REAVKSLQWLRGWVPEHMIEAEFNQLYDELITQKAIE---------------LSADGIPPPGQRR 294
            .||.|||.:||| ||.|     .:.|.:||:..||..               :|:...|....|.
Yeast   298 DEAAKSLSFLRG-VPVH-----DSGLLEELVEIKATYDYEASFGSSNFIDCFISSKSRPKQTLRM 356

  Fly   295 TLGQRLRMWRKRSFLVPFLLVSFSFFTG-HFSGKTPLQTYAVQIFHTLKAPMNKYHATILLGVAE 358
            ..|..|:.:::      |..::|.|:.| :|..||.:.              |.|..:.:.....
Yeast   357 FTGIALQAFQQ------FSGINFIFYYGVNFFNKTGVS--------------NSYLVSFITYAVN 401

  Fly   359 MLATILGVVLIHFTGKRPLVLVSTVGTGLCFFGTATYAHFLSEVPGFTVNNVVVNASSIMPKEGI 423
            ::..:.|:..:.|.|:|.:::|..|        ..|.|:|:..:.|.::..|.  |:.:|     
Yeast   402 VVFNVPGLFFVEFFGRRKVLVVGGV--------IMTIANFIVAIVGCSLKTVA--AAKVM----- 451

  Fly   424 LSQQNISKIFETEQQAIRQETERFTTQLPDIETTTLFDQEIYNRSRRDVVEMMTTDAPMDTTMWP 488
                                                                             
Yeast   452 ----------------------------------------------------------------- 451

  Fly   489 EPSSSPEPIASSSLAPPSTSVKPPLVEELLLVVPKQEHNYLVWVPLILLLLSAFFSHLGIRMLPW 553
                                                       :..|.|.::||.:..|  .:.|
Yeast   452 -------------------------------------------IAFICLFIAAFSATWG--GVVW 471

  Fly   554 ILIGEVFPAEIRNSASGFAGGVGYIFGFLANKLFLLMLSALTLP-----GT---------FAFYA 604
            ::..|::|..:|:..:.......::..|:.         ||..|     |:         |..:.
Yeast   472 VISAELYPLGVRSKCTAICAAANWLVNFIC---------ALITPYIVDTGSHTSSLGAKIFFIWG 527

  Fly   605 SVAFFGTVVLYFTLPETEGRTLGEIEAHFSKKS 637
            |:...|.:|:|.|:.||:|.||.||:..:.|.|
Yeast   528 SLNAMGVIVVYLTVYETKGLTLEEIDELYIKSS 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31100NP_001262395.1 MFS 59..>232 CDD:119392 39/196 (20%)
Sugar_tr 98..633 CDD:278511 105/588 (18%)
MFS <531..616 CDD:119392 18/98 (18%)
SNF3NP_010087.1 MFS_HXT 99..556 CDD:340914 113/631 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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