DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31100 and MSS1

DIOPT Version :9

Sequence 1:NP_001262395.1 Gene:CG31100 / 41075 FlyBaseID:FBgn0051100 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_198006.1 Gene:MSS1 / 832703 AraportID:AT5G26340 Length:526 Species:Arabidopsis thaliana


Alignment Length:635 Identity:128/635 - (20%)
Similarity:214/635 - (33%) Gaps:175/635 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 GGRIATSDVEVSNFRRALPQFLAVS----IKNILLFGY--GMTLG-----------FPTIVIPAI 78
            ||..|||...| .|...:...:.:|    ....|:|||  |::.|           ||.:....:
plant     3 GGGFATSANGV-EFEAKITPIVIISCIMAATGGLMFGYDVGVSGGVTSMPDFLEKFFPVVYRKVV 66

  Fly    79 QGGEGRSETSGDILLNKDEISWFSSINLICVPLGCLFSGLLTQPLGKRRAMQFVNLPILAAWLMF 143
            .|.:   :.|.....:...:..|:|...:.......|:...|:.||:|..|....:..:....:.
plant    67 AGAD---KDSNYCKYDNQGLQLFTSSLYLAGLTATFFASYTTRTLGRRLTMLIAGVFFIIGVALN 128

  Fly   144 HFATRTEHLYAALCLAGLGGGLMEAPVLTYVAEITEPKYRGILSALGTTCVITGVFIQFILGSLM 208
            ..|.....|.|...|.|.|.|.....|..:::||...:.||.|:.|....|..|:    :..:|:
plant   129 AGAQDLAMLIAGRILLGCGVGFANQAVPLFLSEIAPTRIRGGLNILFQLNVTIGI----LFANLV 189

  Fly   209 D-----------WRSVAAVSSAFPVITIIMLCFVPESPVWLIREQRFREAVKSLQWLRGWVPEHM 262
            :           ||....::....::..:....|.|:|..|:...|..|....|:.:||   ...
plant   190 NYGTAKIKGGWGWRLSLGLAGIPALLLTVGALLVTETPNSLVERGRLDEGKAVLRRIRG---TDN 251

  Fly   263 IEAEFNQLYDELITQKAIELSADGIPPPGQRRTLGQRLRMWRKRSFLVPFLLVSFSFFTGHFSGK 327
            :|.||..|.:      |..|:.:...|   .|.|.||    |.|..||  :.|:...|. ..:|.
plant   252 VEPEFADLLE------ASRLAKEVKHP---FRNLLQR----RNRPQLV--IAVALQIFQ-QCTGI 300

  Fly   328 TPLQTYAVQIFHTLKAPMN-KYHATILLGVAEMLATILGVVLIHFTGKRPLVLVSTVGTGLCFFG 391
            ..:..||..:|.||....: ..::.::.|...:|:|::.:..:...|:|.|:|.:.|        
plant   301 NAIMFYAPVLFSTLGFGSDASLYSAVVTGAVNVLSTLVSIYSVDKVGRRVLLLEAGV-------- 357

  Fly   392 TATYAHFLSEVPGFTVNNVVVNASSIMPKEGILSQQNISKIFETEQQAIRQETERFTTQLPDIET 456
                ..|.|:|....:..|.|..:|          .|:||.|                       
plant   358 ----QMFFSQVVIAIILGVKVTDTS----------TNLSKGF----------------------- 385

  Fly   457 TTLFDQEIYNRSRRDVVEMMTTDAPMDTTMWPEPSSSPEPIASSSLAPPSTSVKPPLVEELLLVV 521
                                                                       .:|:||
plant   386 -----------------------------------------------------------AILVVV 391

  Fly   522 PKQEHNYLVWVPLILLLLSAFFSHLGIRMLPWILIGEVFPAEIRNSASGFAGGVGYIFGFLANKL 586
                        :|...::||....|  .|.|::..|.||.|.|::.......|..:|.|:..:.
plant   392 ------------MICTYVAAFAWSWG--PLGWLIPSETFPLETRSAGQSVTVCVNLLFTFIIAQA 442

  Fly   587 FLLMLSALTLPGTFAFYASVAFFGTVVLYFTLPETEGRTLGEIEAHFSKK 636
            ||.||..... |.|.|:::.....:|.:.|.||||:...:.|:.....||
plant   443 FLSMLCHFKF-GIFIFFSAWVLIMSVFVMFLLPETKNIPIEEMTERVWKK 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31100NP_001262395.1 MFS 59..>232 CDD:119392 37/196 (19%)
Sugar_tr 98..633 CDD:278511 108/546 (20%)
MFS <531..616 CDD:119392 22/84 (26%)
MSS1NP_198006.1 MFS_STP 29..475 CDD:340919 114/590 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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