DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31100 and Slc2a12

DIOPT Version :9

Sequence 1:NP_001262395.1 Gene:CG31100 / 41075 FlyBaseID:FBgn0051100 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_001100921.1 Gene:Slc2a12 / 308028 RGDID:1310175 Length:621 Species:Rattus norvegicus


Alignment Length:668 Identity:139/668 - (20%)
Similarity:229/668 - (34%) Gaps:182/668 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 GYGMTLGFPTIVIPAIQG---GEGRSETSGDIL-------LNKDEISWFSSINLICVPLGCLFSG 117
            |.|| ..|.|.|..||.|   |......||.:|       |...|.....|..||...|..|..|
  Rat    39 GPGM-FTFLTSVTAAISGLLVGYELGLISGALLQIRTLLALTCHEQEMVVSSLLIGAFLASLTGG 102

  Fly   118 LLTQPLGKRRAMQFVNLPILAAWLMFHFATRTEHLYAALCLAGLGG------------------- 163
            :|....|:|..:      ||::                 ||.|||.                   
  Rat   103 VLIDRYGRRLTI------ILSS-----------------CLLGLGSLVLILSLSYTLLITGRVAI 144

  Fly   164 ----GLMEAPVLTYVAEITEPKYRGILSALGTTCVITGVFIQFILGSLM-----DWRSVAAVSSA 219
                .|.......|:|||.....||:|.:|....::||:...:|.....     .|:.:..:...
  Rat   145 GVSISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVTGILFAYISNYAFANISNGWKYMFGLVIP 209

  Fly   220 FPVITIIMLCFVPESPVWLIREQRFREAVKSLQWLR--GWVPEHM------IEAEFNQLYDELIT 276
            ..|:..|.:.|:|.||.:|:.:.:...|.|.|:.||  ....|.:      ::.|:...:.:|..
  Rat   210 LGVLQAIAMYFLPPSPRFLVMKGQEEAAGKVLRKLRVISDTAEELTLIKSSLKDEYQYSFWDLFR 274

  Fly   277 QKAIELSADGIPPPGQRRTLGQRLRMWRKRSFLVPFLLVSFSFFTGH----FSGKTPLQTYAVQI 337
            .|.                 ..|.|:      |:...||.|...||.    |...|.|::...|.
  Rat   275 SKD-----------------NMRTRI------LIGLTLVFFVQTTGQPNILFYASTVLKSVGFQS 316

  Fly   338 FHTLKAPMNKYHATILLGVAEMLATILGVVLIHFTGKRPLVLVSTVGTGLCFFGTATYAHFLSEV 402
            ......      |:..:||.::::||...:|:...|.:         |.||...:...|..|:  
  Rat   317 NEAASL------ASTGVGVVKVVSTIPATLLVDHVGSK---------TFLCIGSSVMAASLLT-- 364

  Fly   403 PGFTVNNVVVNASSIMPKEGILSQQNISKIF------ETEQQAIRQETERFTTQLPDIETTTLFD 461
            .|....|:.:|.::|......|:|.....:|      .....::.:..:|.|.          :.
  Rat   365 MGIVNLNINMNFTNICRSHSPLNQSLEELVFYATGNLSVSNSSLGEHLKRVTP----------YS 419

  Fly   462 QEIYNRSRRDVVEMMTTDAPMDTTMWPEPSSSPEPIASSSLA-PPSTSVKPPLVEELLLVVPKQE 525
            :.::              .|:...|.|:...:...:.::.|: .....|..|      .|||.  
  Rat   420 KGLF--------------IPLGNGMEPKGEMAFTSLPNAGLSRTDRQGVTDP------AVVPA-- 462

  Fly   526 HNYLVWVPLILLLLSAFFSHLGIRMLPWILIGEVFPAEIRNSASGFAGGVGYIFGFLANKLFLLM 590
              ...|:.|..||:......:|:..:||:::.|:||..||..|......:.:....|.:..||.:
  Rat   463 --VYKWLSLASLLVYVAAFSIGLGPMPWLVLSEIFPGGIRGRAMALTSSMNWGINLLISLTFLTV 525

  Fly   591 LSALTLPGTFAFY-----ASVAFFGTVVLYFTLPETEGRTLGEIEAHFSKKSDV----------- 639
            ...:.|......|     .|:||   |||:  :|||:|.:|.:|....||.:.|           
  Rat   526 TDLIGLSWVCFIYTVMSLTSLAF---VVLF--IPETKGCSLEQISMELSKANYVKNNICFMSHHQ 585

  Fly   640 ------NLLRKQPSNKLP 651
                  .|.:.:|..:||
  Rat   586 EELVPTQLQKTKPQEQLP 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31100NP_001262395.1 MFS 59..>232 CDD:119392 47/206 (23%)
Sugar_tr 98..633 CDD:278511 117/586 (20%)
MFS <531..616 CDD:119392 24/89 (27%)
Slc2a12NP_001100921.1 MFS_GLUT12_Class3 46..564 CDD:340993 127/619 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 69 1.000 Domainoid score I9382
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.