DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11975 and HSV2

DIOPT Version :9

Sequence 1:NP_001262394.1 Gene:CG11975 / 41074 FlyBaseID:FBgn0037648 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_011739.1 Gene:HSV2 / 853138 SGDID:S000003455 Length:448 Species:Saccharomyces cerevisiae


Alignment Length:358 Identity:123/358 - (34%)
Similarity:179/358 - (50%) Gaps:63/358 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LYAAFNQDQGCFACATDTGFRVYNCDPLKEKERQYFPEG--------GLSHVEMLFRCNYLALVG 70
            |..:||||..||:.|.:.|||::|.|||..|..:.|.|.        |:.:..||:|.||:||||
Yeast    20 LSVSFNQDDSCFSVALENGFRIFNTDPLTSKLSKTFKESATNQSRGTGIGYTRMLYRTNYIALVG 84

  Fly    71 GGIRPLYPPNKVIVWDDLKKSPAISLDFNQPVRAVRLRRDRIVVVLEGVIKVFTFTQQPQQL-HV 134
            ||.||.:..||:|:||||.:...|:|.|...::.|.|.|..||||||..|::|.|...||:: .:
Yeast    85 GGKRPRHALNKLIIWDDLLQKETITLKFMSSIKDVFLSRIHIVVVLENTIEIFQFQTNPQRICPI 149

  Fly   135 FETSSNPNGLCVLCPHSNKSL--------------LAFPGRR-TGHVQIVDLA----NTER---- 176
            .:...|.:...|:|  |:|.|              :|||..: .|.:|:.||:    |::.    
Yeast   150 LDIPPNGSVDYVVC--SSKHLQSQASQSQSKILEIIAFPSNKCVGQIQVADLSQIKYNSQNPKES 212

  Fly   177 --APLEVI-AHEAGISCIALNLQGTRLATAGEKGTLIRIFDTESGKKVSELRRGSNHANIFCINF 238
              .|..:| ||:..|..:.||.|||.:||...:|||||||.|.:|..:.|.|||.:.|:|:.::|
Yeast   213 ALLPTSIIKAHKNPIKLVRLNRQGTMVATCSVQGTLIRIFSTHNGTLIKEFRRGVDKADIYEMSF 277

  Fly   239 NHQSTMVVVASDHGTIHVF------NLEDNKP-----RESSLPI---------IPKYFSSQWSFV 283
            :...:.:.|.|:..|:|:|      |.|.|.|     ..||.|:         .|||..|.||..
Yeast   278 SPNGSKLAVLSNKQTLHIFQIFETTNTETNTPDHSRANGSSHPLKNYIPKGLWRPKYLDSVWSIC 342

  Fly   284 KFSIPQGPRCVCAFGADPNSVVA-ICADGHYYK 315
            ...: :.|    .|.|..|.... :..|..:||
Yeast   343 NAHL-KNP----IFDAHRNDNSGDVTHDNEFYK 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11975NP_001262394.1 WD40 repeat 102..136 CDD:293791 14/34 (41%)
WD40 141..>265 CDD:421866 50/160 (31%)
WD40 repeat 145..180 CDD:293791 14/59 (24%)
WD40 repeat 188..225 CDD:293791 18/36 (50%)
WD40 repeat 233..273 CDD:293791 14/59 (24%)
HSV2NP_011739.1 WD40 <220..>298 CDD:421866 32/77 (42%)
WD40 repeat 228..267 CDD:293791 19/38 (50%)
WD40 repeat 272..298 CDD:293791 7/25 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345377
Domainoid 1 1.000 171 1.000 Domainoid score I768
eggNOG 1 0.900 - - E1_KOG2111
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 171 1.000 Inparanoid score I1004
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001347
OrthoInspector 1 1.000 - - oto100372
orthoMCL 1 0.900 - - OOG6_102082
Panther 1 1.100 - - LDO PTHR11227
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R106
SonicParanoid 1 1.000 - - X947
TreeFam 1 0.960 - -
1312.780

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