DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11975 and G18E

DIOPT Version :10

Sequence 1:NP_649853.1 Gene:CG11975 / 41074 FlyBaseID:FBgn0037648 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_196134.1 Gene:G18E / 830397 AraportID:AT5G05150 Length:374 Species:Arabidopsis thaliana


Alignment Length:319 Identity:122/319 - (38%)
Similarity:172/319 - (53%) Gaps:16/319 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LLYAAFNQDQGCFACATDTGFRVYNCDPLKEKERQYFP-EGGLSHVEMLFRCNYLALVGGGI-RP 75
            :|..|:||....|...|:.||.||:|.|:.:|.....| |.|....||||..|..|.||.|. ..
plant    33 VLSVAWNQVCSGFIVGTNHGFNVYSCKPMIKKSISRAPHESGFKVAEMLFLSNLFAFVGNGYNNS 97

  Fly    76 LYPPNKVIVWDDLKKSPAISLDFNQPVRAVRLRRDRIVVVLEGVIKVFTFTQQPQQLHVFETSSN 140
            .||||||.||||.:......|.|...|.||:|.|:.:||||:..|.|:||...... .|.||..|
plant    98 EYPPNKVFVWDDYRNCCLSELTFKSEVIAVKLAREHVVVVLKQNIYVYTFNNLKVD-RVIETLMN 161

  Fly   141 PNGLCVLCPHSNKSLLAFPGRRTGHVQIVDLA-NTERAPLEVIAHEAGISCIALNLQGTRLATAG 204
            |.|||.:....:|::||.||...|.||:.||. |..:.   :.||::.|:|:.|.|.|:.||||.
plant   162 PKGLCCVTHVESKAVLACPGFHPGQVQVHDLRWNVIKF---IKAHDSAIACMTLTLDGSLLATAS 223

  Fly   205 EKGTLIRIFDTESGKKVSELRRGSNHANIFCINFNHQSTMVVVASDHGTIHVFNLEDN----KPR 265
            .||||||||:...|..:.|.|||...|.|:.:..:.....|..:|:.||:|||.|..:    .|.
plant   224 TKGTLIRIFNAVDGTLLQEFRRGVERAEIYNVAISSNLKWVAASSEKGTLHVFRLRPDILSFDPA 288

  Fly   266 ESS---LPIIPKY-FSSQWSFVKFSIPQGPRCVCAFGADPNSVVAICADGHYYKFLFNN 320
            .||   ..|:||| :.::.||.:||:|...:.:..||:: |:|:.:..||.:.:..|::
plant   289 SSSSFIRVILPKYLYENERSFAQFSLPASTKFIVGFGSE-NTVLLVGIDGSFRRCKFDH 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11975NP_649853.1 WD40 <70..>265 CDD:441893 80/200 (40%)
WD40 repeat 102..136 CDD:293791 14/33 (42%)
WD40 repeat 145..180 CDD:293791 12/35 (34%)
WD40 repeat 188..225 CDD:293791 19/36 (53%)
WD40 repeat 233..273 CDD:293791 13/46 (28%)
G18ENP_196134.1 WD40 repeat 165..201 CDD:293791 13/38 (34%)
WD40 <185..>279 CDD:441893 39/96 (41%)
WD40 repeat 207..244 CDD:293791 19/36 (53%)
WD40 repeat 252..289 CDD:293791 10/36 (28%)

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