DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11975 and WIPI1

DIOPT Version :9

Sequence 1:NP_001262394.1 Gene:CG11975 / 41074 FlyBaseID:FBgn0037648 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_060453.3 Gene:WIPI1 / 55062 HGNCID:25471 Length:446 Species:Homo sapiens


Alignment Length:340 Identity:87/340 - (25%)
Similarity:160/340 - (47%) Gaps:41/340 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 AFNQDQGCFACATDTGFRVYNCDPLKEKERQY----FPEGGLSHVEMLFRCNYLALVGGGIRPLY 77
            :||||....|..|..|:::::...:::.::.:    .|:  :..||.||..:.:.:|..     .
Human    21 SFNQDCTSLATGTKAGYKLFSLSSVEQLDQVHGSNEIPD--VYIVERLFSSSLVVVVSH-----T 78

  Fly    78 PPNKVIVWDDLKKSPAISLDFNQPVRAVRLRRDRIVVVLEGVIKVFTFTQQPQQLHVFETSSNPN 142
            .|.::.|:...|.:...:..::..:.::||.|.|::|.||..|.:...........:.:..:||.
Human    79 KPRQMNVYHFKKGTEICNYSYSSNILSIRLNRQRLLVCLEESIYIHNIKDMKLLKTLLDIPANPT 143

  Fly   143 GLCVLCPHSNKSLLAFPGRRT-GHVQIVDLANTERAPLEVIAHEAGISCIALNLQGTRLATAGEK 206
            |||.|..:.:.|.||:||..| |.:.:.| .|:.:....:.|||..::.|..|..|::||:|.||
Human   144 GLCALSINHSNSYLAYPGSLTSGEIVLYD-GNSLKTVCTIAAHEGTLAAITFNASGSKLASASEK 207

  Fly   207 GTLIRIFDTESGKKVSELRRG-SNHANIFCINFNHQSTMVVVASDHGTIHVFNLE---DNKPRES 267
            ||:||:|....|:|:.|.||| ..:..|..:.|:..|..:..:|:..|:|:|.||   :::|.|.
Human   208 GTVIRVFSVPDGQKLYEFRRGMKRYVTISSLVFSMDSQFLCASSNTETVHIFKLEQVTNSRPEEP 272

  Fly   268 SL--PIIPKYFSSQWSFVKFSIP----------------QGPRCVCAFGAD---PNSVVAICADG 311
            |.  ..:.|.|.:..:::...:.                .|.|.:|.....   |..:|| .:.|
Human   273 STWSGYMGKMFMAATNYLPTQVSDMMHQDRAFATARLNFSGQRNICTLSTIQKLPRLLVA-SSSG 336

  Fly   312 HYYKFLFN--NKGEC 324
            |.|.:..:  :.|||
Human   337 HLYMYNLDPQDGGEC 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11975NP_001262394.1 WD40 repeat 102..136 CDD:293791 8/33 (24%)
WD40 141..>265 CDD:421866 45/128 (35%)
WD40 repeat 145..180 CDD:293791 11/35 (31%)
WD40 repeat 188..225 CDD:293791 16/36 (44%)
WD40 repeat 233..273 CDD:293791 12/44 (27%)
WIPI1NP_060453.3 WD 1 3..42 7/20 (35%)
WD 2 47..88 8/47 (17%)
WD40 <77..>262 CDD:225201 55/190 (29%)
WD40 <88..262 CDD:295369 53/174 (30%)
WD 3 92..126 8/33 (24%)
WD 4 131..173 14/42 (33%)
Nuclear receptor interaction 131..136 0/4 (0%)
WD40 repeat 145..184 CDD:293791 12/39 (31%)
WD 5 177..216 16/38 (42%)
WD40 repeat 189..226 CDD:293791 16/36 (44%)
WD 6 222..261 11/38 (29%)
WD40 repeat 236..268 CDD:293791 8/31 (26%)
WD40 repeat 274..312 CDD:293791 2/37 (5%)
WD 7 304..343 9/39 (23%)
WD40 repeat 320..358 CDD:293791 9/33 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 386..406
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54442
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R106
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.950

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