Sequence 1: | NP_001262394.1 | Gene: | CG11975 / 41074 | FlyBaseID: | FBgn0037648 | Length: | 340 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_666052.1 | Gene: | Wipi1 / 52639 | MGIID: | 1261864 | Length: | 446 | Species: | Mus musculus |
Alignment Length: | 342 | Identity: | 90/342 - (26%) |
---|---|---|---|
Similarity: | 163/342 - (47%) | Gaps: | 45/342 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 AFNQDQGCFACATDTGFRVYNCDPLKEKERQY----FPEGGLSHVEMLFRCNYLALVGGGIRPLY 77
Fly 78 PPNKVIVWDDLKKSPAISLDFNQPVRAVRLRRDRIVVVLEGVIKVFTFTQQPQQLHVFETSSNPN 142
Fly 143 GLCVLCPHSNKSLLAFPG-RRTGHVQIVDLANTERAPLEVIAHEAGISCIALNLQGTRLATAGEK 206
Fly 207 GTLIRIFDTESGKKVSELRRG-SNHANIFCINFNHQSTMVVVASDHGTIHVFNLE---DNKPRES 267
Fly 268 SL--PIIPKYFSSQWSFVKFSIP----------------QGPRCVCAFGAD---PNSVVAICADG 311
Fly 312 HYYKFLFN----NKGEC 324 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG11975 | NP_001262394.1 | WD40 repeat | 102..136 | CDD:293791 | 9/33 (27%) |
WD40 | 141..>265 | CDD:421866 | 45/128 (35%) | ||
WD40 repeat | 145..180 | CDD:293791 | 11/35 (31%) | ||
WD40 repeat | 188..225 | CDD:293791 | 16/36 (44%) | ||
WD40 repeat | 233..273 | CDD:293791 | 12/44 (27%) | ||
Wipi1 | NP_666052.1 | WD40 | <88..262 | CDD:295369 | 55/174 (32%) |
WD40 | <100..265 | CDD:225201 | 55/165 (33%) | ||
Nuclear receptor interaction. /evidence=ECO:0000250 | 131..136 | 0/4 (0%) | |||
WD40 repeat | 144..184 | CDD:293791 | 13/40 (33%) | ||
WD 1 | 184..224 | 18/39 (46%) | |||
WD40 repeat | 189..226 | CDD:293791 | 16/36 (44%) | ||
WD 2 | 230..269 | 9/38 (24%) | |||
WD40 repeat | 236..265 | CDD:293791 | 7/28 (25%) | ||
WD40 repeat | 272..312 | CDD:293791 | 3/39 (8%) | ||
WD 3 | 312..351 | 11/41 (27%) | |||
WD40 repeat | 320..358 | CDD:293791 | 11/35 (31%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 386..406 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG54442 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R106 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.950 |