DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11975 and wdr45

DIOPT Version :10

Sequence 1:NP_649853.1 Gene:CG11975 / 41074 FlyBaseID:FBgn0037648 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_012812316.2 Gene:wdr45 / 496788 XenbaseID:XB-GENE-972376 Length:355 Species:Xenopus tropicalis


Alignment Length:352 Identity:153/352 - (43%)
Similarity:222/352 - (63%) Gaps:29/352 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 NGLLYAAFNQDQGCFACATDTGFRVYNCDPLKEK----ERQYFPEGGLSHVEMLFRCNYLALVGG 71
            |||   .|||||.||.||.:||.|::|.:||.||    :.|.   |.:..||||.|||.||||||
 Frog     8 NGL---RFNQDQSCFCCAMETGVRIFNIEPLMEKGHLDQEQV---GSVGQVEMLHRCNLLALVGG 66

  Fly    72 GIRPLYPPNKVIVWDDL---KKSPAISLDFNQPVRAVRLRRDRIVVVLEGVIKVFTFTQQPQQLH 133
            |..|.:....|::|||.   |....:...|.:||.:||||.::||:.|:..|.|::|...|.:|.
 Frog    67 GSNPKFSDISVLIWDDSRDGKDKLVLEFTFTKPVLSVRLRSEKIVIALKNRIYVYSFPDNPTKLF 131

  Fly   134 VFETSSNPNGLCVLCPHSNKSLLAFPGRRTGHVQIVDLAN----TERAPLEVIAHEAGISCIALN 194
            .|:|..||.|||.|||...|.||.|||.:.|.:|:|||.|    :..||..:.||::.:.|:|:|
 Frog   132 EFDTRDNPKGLCDLCPSLEKQLLLFPGHKCGSLQLVDLCNAKPGSSSAPFTINAHQSELGCLAVN 196

  Fly   195 LQGTRLATAGEKGTLIRIFDTESGKKVSELRRGSNHANIFCINFNHQSTMVVVASDHGTIHVFNL 259
            .|||.:|:|..||||||:|||::.:::.|||||::.|.::||||:|.|:.:..:||.||:|:|.|
 Frog   197 QQGTLVASASRKGTLIRLFDTQTREQLVELRRGTDPATLYCINFSHDSSFLCSSSDKGTVHIFAL 261

  Fly   260 EDNK-PRESSL-------PIIPKYFSSQWSFVKFSIPQGPRCVCAFGADP----NSVVAICADGH 312
            :|.| .|.|:|       |:|.:|..||||...|::|....|:||||.:.    |||:|:|.||.
 Frog   262 KDTKLNRRSALARVGKVGPMIGQYVDSQWSLASFTVPAESACICAFGKNTSKNVNSVIAVCVDGT 326

  Fly   313 YYKFLFNNKGECSRDICTQFLELQDDE 339
            ::|::|..:|.|:|:....:|::.||:
 Frog   327 FHKYVFTPEGNCNREAFDVYLDICDDD 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11975NP_649853.1 WD40 <70..>265 CDD:441893 88/202 (44%)
WD40 repeat 102..136 CDD:293791 13/33 (39%)
WD40 repeat 145..180 CDD:293791 18/38 (47%)
WD40 repeat 188..225 CDD:293791 18/36 (50%)
WD40 repeat 233..273 CDD:293791 19/47 (40%)
wdr45XP_012812316.2 WD40 6..259 CDD:475233 117/256 (46%)
WD40 repeat 101..137 CDD:293791 14/35 (40%)
WD40 repeat 142..182 CDD:293791 19/39 (49%)
WD40 <162..>269 CDD:441893 48/106 (45%)
WD40 repeat 191..227 CDD:293791 18/35 (51%)

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