DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11975 and wdr45

DIOPT Version :9

Sequence 1:NP_001262394.1 Gene:CG11975 / 41074 FlyBaseID:FBgn0037648 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_012812316.2 Gene:wdr45 / 496788 XenbaseID:XB-GENE-972376 Length:355 Species:Xenopus tropicalis


Alignment Length:352 Identity:153/352 - (43%)
Similarity:222/352 - (63%) Gaps:29/352 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 NGLLYAAFNQDQGCFACATDTGFRVYNCDPLKEK----ERQYFPEGGLSHVEMLFRCNYLALVGG 71
            |||   .|||||.||.||.:||.|::|.:||.||    :.|.   |.:..||||.|||.||||||
 Frog     8 NGL---RFNQDQSCFCCAMETGVRIFNIEPLMEKGHLDQEQV---GSVGQVEMLHRCNLLALVGG 66

  Fly    72 GIRPLYPPNKVIVWDDL---KKSPAISLDFNQPVRAVRLRRDRIVVVLEGVIKVFTFTQQPQQLH 133
            |..|.:....|::|||.   |....:...|.:||.:||||.::||:.|:..|.|::|...|.:|.
 Frog    67 GSNPKFSDISVLIWDDSRDGKDKLVLEFTFTKPVLSVRLRSEKIVIALKNRIYVYSFPDNPTKLF 131

  Fly   134 VFETSSNPNGLCVLCPHSNKSLLAFPGRRTGHVQIVDLAN----TERAPLEVIAHEAGISCIALN 194
            .|:|..||.|||.|||...|.||.|||.:.|.:|:|||.|    :..||..:.||::.:.|:|:|
 Frog   132 EFDTRDNPKGLCDLCPSLEKQLLLFPGHKCGSLQLVDLCNAKPGSSSAPFTINAHQSELGCLAVN 196

  Fly   195 LQGTRLATAGEKGTLIRIFDTESGKKVSELRRGSNHANIFCINFNHQSTMVVVASDHGTIHVFNL 259
            .|||.:|:|..||||||:|||::.:::.|||||::.|.::||||:|.|:.:..:||.||:|:|.|
 Frog   197 QQGTLVASASRKGTLIRLFDTQTREQLVELRRGTDPATLYCINFSHDSSFLCSSSDKGTVHIFAL 261

  Fly   260 EDNK-PRESSL-------PIIPKYFSSQWSFVKFSIPQGPRCVCAFGADP----NSVVAICADGH 312
            :|.| .|.|:|       |:|.:|..||||...|::|....|:||||.:.    |||:|:|.||.
 Frog   262 KDTKLNRRSALARVGKVGPMIGQYVDSQWSLASFTVPAESACICAFGKNTSKNVNSVIAVCVDGT 326

  Fly   313 YYKFLFNNKGECSRDICTQFLELQDDE 339
            ::|::|..:|.|:|:....:|::.||:
 Frog   327 FHKYVFTPEGNCNREAFDVYLDICDDD 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11975NP_001262394.1 WD40 repeat 102..136 CDD:293791 13/33 (39%)
WD40 141..>265 CDD:421866 61/128 (48%)
WD40 repeat 145..180 CDD:293791 18/38 (47%)
WD40 repeat 188..225 CDD:293791 18/36 (50%)
WD40 repeat 233..273 CDD:293791 19/47 (40%)
wdr45XP_012812316.2 WD40 repeat 101..137 CDD:293791 14/35 (40%)
WD40 repeat 142..182 CDD:293791 19/39 (49%)
WD40 <182..>269 CDD:421866 40/86 (47%)
WD40 repeat 191..227 CDD:293791 18/35 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54442
OrthoDB 1 1.010 - - D454738at33208
OrthoFinder 1 1.000 - - FOG0001347
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R106
SonicParanoid 1 1.000 - - X947
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.960

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