DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11975 and Wdr45

DIOPT Version :9

Sequence 1:NP_001262394.1 Gene:CG11975 / 41074 FlyBaseID:FBgn0037648 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_006256772.1 Gene:Wdr45 / 302559 RGDID:1359718 Length:361 Species:Rattus norvegicus


Alignment Length:365 Identity:157/365 - (43%)
Similarity:226/365 - (61%) Gaps:39/365 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QNPYGNGLLYAAFNQDQGCFACATDTGFRVYNCDPLKEKERQYFPEGGLSH--------VEMLFR 62
            |.|. .|:....|||||.||.||.:||.|:||.:||.||       |.|.|        ||||.|
  Rat     3 QQPL-RGVTSLHFNQDQSCFCCAMETGVRIYNVEPLMEK-------GHLDHEQVGSVGLVEMLHR 59

  Fly    63 CNYLALVGGGIRPLYPP-NKVIVWDDLKKSP------AISLDFNQPVRAVRLRRDRIVVVLEGVI 120
            .|.|||||||..|.:.. :.|::|||.::..      .:...|.:||.|||:|.|:||:||...|
  Rat    60 SNLLALVGGGSSPKFSEISAVLIWDDAREGKDSKDKLVLEFTFTKPVLAVRMRHDKIVIVLRNRI 124

  Fly   121 KVFTFTQQPQQLHVFETSSNPNGLCVLCPHSNKSLLAFPGRRTGHVQIVDLANTE----RAPLEV 181
            .|::|...|::|..|:|..||.|||.|||...|.||.|||.:.|.:|:||||:|:    .||..:
  Rat   125 YVYSFPDNPRKLFEFDTRDNPKGLCDLCPSLEKQLLVFPGHKCGSLQLVDLASTKPGTSSAPFTI 189

  Fly   182 IAHEAGISCIALNLQGTRLATAGEKGTLIRIFDTESGKKVSELRRGSNHANIFCINFNHQSTMVV 246
            .||::.::|::||..||.:|:|.:||||||:|||:|.:|:.|||||::.|.::||||:|.|:.:.
  Rat   190 NAHQSDVACVSLNQPGTVVASASQKGTLIRLFDTQSKEKLVELRRGTDPATLYCINFSHDSSFLC 254

  Fly   247 VASDHGTIHVFNLEDNK-PRESSL-------PIIPKYFSSQWSFVKFSIPQGPRCVCAFGADP-- 301
            .:||.||:|:|.|:|.: .|.|:|       |:|.:|..||||...|::|....|:||||.:.  
  Rat   255 ASSDKGTVHIFALKDTRLNRRSALARVGKVGPMIGQYVDSQWSLASFTVPAESACICAFGRNTSK 319

  Fly   302 --NSVVAICADGHYYKFLFNNKGECSRDICTQFLELQDDE 339
              |||:|||.||.::|::|...|.|:|:....:|::.||:
  Rat   320 NVNSVIAICVDGTFHKYVFTPDGNCNREAFDVYLDICDDD 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11975NP_001262394.1 WD40 repeat 102..136 CDD:293791 15/33 (45%)
WD40 141..>265 CDD:421866 62/128 (48%)
WD40 repeat 145..180 CDD:293791 19/38 (50%)
WD40 repeat 188..225 CDD:293791 19/36 (53%)
WD40 repeat 233..273 CDD:293791 18/47 (38%)
Wdr45XP_006256772.1 WD40 <188..>275 CDD:421866 40/86 (47%)
WD40 repeat 197..233 CDD:293791 19/35 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2111
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54442
OrthoDB 1 1.010 - - D454738at33208
OrthoFinder 1 1.000 - - FOG0001347
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X947
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.830

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