DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11975 and SPAC458.06

DIOPT Version :9

Sequence 1:NP_001262394.1 Gene:CG11975 / 41074 FlyBaseID:FBgn0037648 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_594700.1 Gene:SPAC458.06 / 2543338 PomBaseID:SPAC458.06 Length:364 Species:Schizosaccharomyces pombe


Alignment Length:247 Identity:88/247 - (35%)
Similarity:144/247 - (58%) Gaps:9/247 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 AFNQDQGCFACATDTGFRVYNCDPLKEKERQYFPEGGLSHVEMLFRCNYLALVGGGIRPLYPPNK 81
            :.|||..|.:.|.|||::::..:|||.:.::.|.:||||.|:||||.|.|.|||||..|.|.|||
pombe     8 SLNQDASCMSVALDTGYKIFQINPLKLRAQRQFNDGGLSIVKMLFRSNVLLLVGGGGNPKYAPNK 72

  Fly    82 VIVWDDLKKSPAISLDFNQPVRAVRLRRDRIVVVLEGVIKVFTFTQQPQQLHVFETSSNPNGLCV 146
            :|||||:|:.|...|:.|..::.:......:.:.....:.::.|....:.....:| .||.|||.
pombe    73 LIVWDDVKERPVKELELNFEIKGICFDGKLLAIATASKLFLYQFGNNLKLQRCLDT-QNPKGLCA 136

  Fly   147 LCPHSNKSLLAFPGRRTGHVQIV----DLANTERAPLEVIAHEAGISCIALNLQGTRLATAGEKG 207
            :.....|:.:.||.|:.|.:||:    |..||...|    ||::.|||:.::..|:::|::...|
pombe   137 MVTTVEKTAIVFPSRKVGQLQILFLFKDHMNTSIVP----AHDSEISCLGISKTGSKIASSSTNG 197

  Fly   208 TLIRIFDTESGKKVSELRRGSNHANIFCINFNHQSTMVVVASDHGTIHVFNL 259
            |||||:::|:|:|:.|.|||..|..:..:.|:....::..||...|:|:|:|
pombe   198 TLIRIWNSETGEKICEFRRGYQHTAVCQLAFSPDELLLACASKKETLHIFSL 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11975NP_001262394.1 WD40 repeat 102..136 CDD:293791 1/33 (3%)
WD40 141..>265 CDD:421866 43/123 (35%)
WD40 repeat 145..180 CDD:293791 12/38 (32%)
WD40 repeat 188..225 CDD:293791 15/36 (42%)
WD40 repeat 233..273 CDD:293791 7/27 (26%)
SPAC458.06NP_594700.1 WD40 2..>261 CDD:225201 88/247 (36%)
WD40 <58..204 CDD:295369 50/150 (33%)
WD40 repeat 93..127 CDD:293791 1/33 (3%)
WD40 <172..249 CDD:295369 28/80 (35%)
WD40 repeat 179..220 CDD:293791 17/40 (43%)
WD40 repeat 223..260 CDD:293791 7/27 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 160 1.000 Domainoid score I994
eggNOG 1 0.900 - - E1_KOG2111
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 176 1.000 Inparanoid score I1157
OMA 1 1.010 - - QHG54442
OrthoFinder 1 1.000 - - FOG0001347
OrthoInspector 1 1.000 - - oto102147
orthoMCL 1 0.900 - - OOG6_102082
Panther 1 1.100 - - LDO PTHR11227
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R106
SonicParanoid 1 1.000 - - X947
TreeFam 1 0.960 - -
1312.860

Return to query results.
Submit another query.