DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(var)3-9 and ZFX

DIOPT Version :10

Sequence 1:NP_649852.2 Gene:E(var)3-9 / 41073 FlyBaseID:FBgn0260243 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_001317256.1 Gene:ZFX / 7543 HGNCID:12869 Length:844 Species:Homo sapiens


Alignment Length:652 Identity:126/652 - (19%)
Similarity:213/652 - (32%) Gaps:247/652 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 SDDAAVADMAEILEQMNDWN-IKVAREDGRPQYMCIACIAEFHRLIKFKRSCVE----TQEQFGE 101
            |::..|||.|.  |.:.|.| |.|.::|..                  |.:|.:    :.:..|:
Human   216 SEEVLVADCAS--EAVIDANGIPVDQQDDD------------------KGNCEDYLMISLDDAGK 260

  Fly   102 LEYQREHNGIVIKREIEPEEEKFCGF------IYLDTDEEDNSDEDGSRRVCAVFDIPHVPIKEE 160
            :|:... :|:.:..|.|.:..|..|.      :|:...:....|..|:      .||.....:.:
Human   261 IEHDGS-SGMTMDTESEIDPCKVDGTCPEVIKVYIFKADPGEDDLGGT------VDIVESEPEND 318

  Fly   161 HMARVPLQNSDKFQPPEPKNFASPVDSRFDMIDNDALTSGMLGPSIEDLS-GTVDD--------G 216
            |...:..|||....|.|...:.:..||:               |..|||: ..:.|        |
Human   319 HGVELLDQNSSIRVPREKMVYMTVNDSQ---------------PEDEDLNVAEIADEVYMEVIVG 368

  Fly   217 TED------------EEEEEEEIVRF-------TYDDDND--------AAAPLPPPLYSPVVCCK 254
            .||            ::.::.||..|       .|.:::|        |:|.|            
Human   369 EEDAAAAAAAAAVHEQQMDDNEIKTFMPIAWAAAYGNNSDGIENRNGTASALL------------ 421

  Fly   255 LCFYESPDQDAHMEHMRRT-----------------------HLLKDWECHICGKKFTNAQESR- 295
                 ..|:.|.:..:.:.                       |.|..:.|.||||||    :|| 
Human   422 -----HIDESAGLGRLAKQKPKKRRRPDSRQYQTAIIIGPDGHPLTVYPCMICGKKF----KSRG 477

  Fly   296 -IKFHIKYHK---LQRHVKCPVCGFICSSKETLKEHKQAVHVRTK------CTYCGKTVKNA-TL 349
             :|.|:|.|.   .::..:|..|.:..:.|.:|..|.::..:.:|      |..|||...:| .|
Human   478 FLKRHMKNHPEHLAKKKYRCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGAL 542

  Fly   350 HAHLKKHLEEG----------EAELAQQLKKLEQLPVNLQSQHLSSLESSVAEVTTASEGSNIPG 404
            ..|...|.|:|          |.|.|:|         .|.::||.::.|           .|.| 
Human   543 FTHKMVHKEKGANKMHKCKFCEYETAEQ---------GLLNRHLLAVHS-----------KNFP- 586

  Fly   405 ESTVPEDSNVTENSSVPSIETSNHADIQCPMG--PPA---------NGEVPDVADVASPSTEPTE 458
                                   |..::|..|  .|:         .||.|              
Human   587 -----------------------HICVECGKGFRHPSELKKHMRIHTGEKP-------------- 614

  Fly   459 SVTKCSYCSDTFEKAQQLQAHVLATHTQTRKRRRSSDNQSLVRKTTQEIP-TSPIAKITKKQTIE 522
              .:|.||......:..|:.||...|                   ::|:| ...|..:|...|.|
Human   615 --YQCQYCEYRSADSSNLKTHVKTKH-------------------SKEMPFKCDICLLTFSDTKE 658

  Fly   523 SKERVVLESSSQLDSTAQQESRTSATSNDSSPVQQVPEKAY-ISCYICGRSFDLKIKLNRHLKQH 586
            .::..::...|:.......:.::|.:|:....:..|..|.| ..|.:|.:.|....:|.:|:..|
Human   659 VQQHALIHQESKTHQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCDMCDKGFHRPSELKKHVAAH 723

  Fly   587 KG 588
            ||
Human   724 KG 725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(var)3-9NP_649852.2 zf-AD 18..102 CDD:462262 14/64 (22%)
zf-C2H2_2 253..>334 CDD:463690 22/108 (20%)
C2H2 Zn finger 253..274 CDD:275368 2/43 (5%)
C2H2 Zn finger 281..303 CDD:275368 12/23 (52%)
PHA00732 310..>358 CDD:177300 14/54 (26%)
C2H2 Zn finger 311..332 CDD:275368 5/20 (25%)
C2H2 Zn finger 337..356 CDD:275368 7/19 (37%)
ZFXNP_001317256.1 Zfx_Zfy_act 109..449 CDD:461400 51/291 (18%)
ROS_MUCR <416..>496 CDD:473244 20/100 (20%)
C2H2 Zn finger 466..486 CDD:275368 12/23 (52%)
C2H2 Zn finger 497..521 CDD:275368 5/23 (22%)
C2H2 Zn finger 529..549 CDD:275368 7/19 (37%)
COG5048 582..>719 CDD:227381 33/206 (16%)
C2H2 Zn finger 589..609 CDD:275368 3/19 (16%)
C2H2 Zn finger 617..636 CDD:275368 6/18 (33%)
C2H2 Zn finger 674..695 CDD:275368 2/20 (10%)
C2H2 Zn finger 703..723 CDD:275368 5/19 (26%)
zf-C2H2 758..780 CDD:395048
C2H2 Zn finger 760..780 CDD:275368
zf-H2C2_2 772..796 CDD:463886
C2H2 Zn finger 788..809 CDD:275368
C2H2 Zn finger 817..837 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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