DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(var)3-9 and zbtb41

DIOPT Version :10

Sequence 1:NP_649852.2 Gene:E(var)3-9 / 41073 FlyBaseID:FBgn0260243 Length:588 Species:Drosophila melanogaster
Sequence 2:XP_001922702.4 Gene:zbtb41 / 573743 ZFINID:ZDB-GENE-130530-649 Length:889 Species:Danio rerio


Alignment Length:569 Identity:111/569 - (19%)
Similarity:183/569 - (32%) Gaps:193/569 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 GRPQYMCIACIAEFHRLIKFKRSCVETQEQFGELEYQREH-NGIVIKREIEPEEEK--FCGFIYL 130
            |...:.|..|:           .|..|:...  ..::::| :|..::|    :|.|  ||..::.
Zfish   383 GEKPFQCDICL-----------QCYSTKSNL--TVHKKKHDSGTPVQR----KEHKCPFCNKLHA 430

  Fly   131 DTDEEDNSDEDGSRRV----------------------CAVFDIPHV-----PIKEEHMARVPLQ 168
                   |.:..||.|                      |   ||.|.     |..||||.   |.
Zfish   431 -------SKKTLSRHVKRFHPDHLQEFLTQKKKSEVWKC---DICHKSFSRRPHLEEHMI---LH 482

  Fly   169 NSDKFQPPEPKNFASPVD---SRFDMIDNDALTSGMLGPSIEDLSGTVDDGTEDEEEEEEEIVRF 230
            :.||     |...|...|   |||..:                           :.:|:..:   
Zfish   483 SQDK-----PFKCAYCDDYFKSRFARL---------------------------KHQEKFHL--- 512

  Fly   231 TYDDDNDAAAPLPPPLYSPVVCCKLCFYESPDQDAHMEHMRRTHLLK-DWECHICGKKFTNAQES 294
                     .|.|         |.:|..:..|......|:..||..| .|.|.:|||..  .:.:
Zfish   513 ---------GPFP---------CDICGRQFNDTGNRKRHIECTHGGKRKWTCFLCGKSV--RERT 557

  Fly   295 RIKFHIKYHKLQRHVKCPVCGFICSSKETLKEHKQAVH--VRTKCTYCGKTVKNATLHAHLKKHL 357
            .::.|::.|..::...|.:||.......:.:.|.:..|  .|.:|..||||.   ..|.|||||.
Zfish   558 TLREHLRIHSGEKPHLCSICGQSFRHGSSYRLHLRVHHEDKRYECEECGKTF---IRHDHLKKHK 619

  Fly   358 EEGEAELAQQ-------LKKLEQLPVNLQSQHLSSLESSVAEVTTASEGSNIPGESTVPEDSNVT 415
            :....|.|.|       .::.:.|.|:.:|.||                    ||........|.
Zfish   620 KIHTGEKAHQCEECGKCFRRADHLTVHYKSIHL--------------------GEKIWQRYKAVV 664

  Fly   416 ENSSVPSIETSNHADIQCPMGPPANGEVPDVADVASPSTEPTESVTK------------CSYCSD 468
            ....|...|.....::.... ...:||.|....:.:.:....:::||            |.:||.
Zfish   665 HQCQVCKKEFRGKTNLMSHF-RTHSGEKPHKCVICNQTFSIKKTLTKHMVIHSDVRPFNCPHCSA 728

  Fly   469 TFEKAQQLQAHVLATHTQTRKRRRSSDNQSLVRKTTQEIPTSPIAKI-------TKKQTIESKER 526
            ||::..:|:.||...|:.     |..|.|       |..|.||..|:       ...:..::..:
Zfish   729 TFKRKDKLKYHVDHVHSV-----RLLDQQ-------QNQPASPANKLIDPSLSNKNSKPCQNASK 781

  Fly   527 VVLESSS----------QLDSTAQQESRTSATSNDSSPVQQVPEKAYIS 565
            .||:|.:          .:..|.:.:.......:...|....|:::|.|
Zfish   782 TVLQSVAADVCVPVTLIPVQMTEEADLAVHGVPHGILPALSQPQQSYQS 830

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(var)3-9NP_649852.2 zf-AD 18..102 CDD:462262 5/32 (16%)
zf-C2H2_2 253..>334 CDD:463690 19/83 (23%)
C2H2 Zn finger 253..274 CDD:275368 4/20 (20%)
C2H2 Zn finger 281..303 CDD:275368 5/21 (24%)
PHA00732 310..>358 CDD:177300 17/49 (35%)
C2H2 Zn finger 311..332 CDD:275368 4/20 (20%)
C2H2 Zn finger 337..356 CDD:275368 9/18 (50%)
zbtb41XP_001922702.4 BTB_POZ_ZBTB41 39..152 CDD:349535
C2H2 Zn finger 361..381 CDD:275368
C2H2 Zn finger 389..409 CDD:275368 4/32 (13%)
C2H2 Zn finger 422..440 CDD:275368 5/24 (21%)
COG5048 458..774 CDD:227381 87/412 (21%)
C2H2 Zn finger 462..482 CDD:275368 9/25 (36%)
C2H2 Zn finger 490..507 CDD:275368 5/43 (12%)
C2H2 Zn finger 517..538 CDD:275368 4/20 (20%)
C2H2 Zn finger 546..566 CDD:275368 5/21 (24%)
C2H2 Zn finger 574..594 CDD:275368 4/19 (21%)
C2H2 Zn finger 602..622 CDD:275368 11/22 (50%)
C2H2 Zn finger 630..651 CDD:275368 3/20 (15%)
C2H2 Zn finger 667..684 CDD:275368 2/16 (13%)
C2H2 Zn finger 695..715 CDD:275368 2/19 (11%)
C2H2 Zn finger 723..740 CDD:275368 6/16 (38%)
Blue background indicates that the domain is not in the aligned region.

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