DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(var)3-9 and Zfp711

DIOPT Version :10

Sequence 1:NP_649852.2 Gene:E(var)3-9 / 41073 FlyBaseID:FBgn0260243 Length:588 Species:Drosophila melanogaster
Sequence 2:XP_002730311.1 Gene:Zfp711 / 302327 RGDID:1562768 Length:805 Species:Rattus norvegicus


Alignment Length:704 Identity:134/704 - (19%)
Similarity:237/704 - (33%) Gaps:241/704 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 DMDQAIVKPIFGSDD---AAVADMAEILEQMNDWNIKV--------AREDGRPQYMCIACIAEFH 83
            |.|...||..  |:|   .::.|:.|.||.|.:..:|:        .:|||..        :|..
  Rat   190 DDDDDDVKST--SEDYLMISLDDVGEKLEHMGNTPLKIGSDGSQEDVKEDGFG--------SEVI 244

  Fly    84 RLIKFKRSCVETQEQFG-----ELEYQREHN--GIVIKREIEPEEEKFCGFIYLDTDEEDNSDED 141
            ::..||....:..|..|     |.||...|:  |::.:..::.|:     .:|:..  :|:|.|:
  Rat   245 KVYIFKAEAEDDVEIGGTEIVTESEYTSGHSVAGVLDQSRMQREK-----MVYMAV--KDSSQEE 302

  Fly   142 GSRRVCAVFDIPHVPI----KEEHMARVPLQNSDKFQPPEPKNFASPVDSR-------------- 188
            .......:.|..::.:    :|.::..:.|::||..:...|..:.:..|.|              
  Rat   303 DDISYAEISDELYMEVIIGEEEGNLLEIQLEDSDVNKTVSPVVYPASYDERRVSRRYEDCQATGN 367

  Fly   189 -FD-------------------MIDNDAL----------------TSGMLGPSIEDLS------- 210
             ||                   |..|..|                |:.::||..:.|:       
  Rat   368 TFDSALENRSTTAAQYLQICDSMNTNKVLKQKIKKRRRGETRQWQTAVIIGPDGQPLTVYPCHIC 432

  Fly   211 ---------------------------GTVDDGTEDEE----------------EEEEEIVRFT- 231
                                       .|..|.|.:::                ::..|...:| 
  Rat   433 TKKFKSRGFLKRHMKNHPDHLMRKKYQCTDCDFTTNKKVSFHNHLESHKLINKVDKTHEFTEYTR 497

  Fly   232 -YDDDNDAAAPL----------PPPLYSPVVCCKLCFYESPDQDAHMEHMRRTHLLKDWE--CHI 283
             |.:    |:||          .|.::.    ||.|.||:.:|.....|:...| .|.:.  |..
  Rat   498 RYRE----ASPLSSNKLILRDKEPKMHK----CKYCDYETAEQGLLNRHLLAVH-SKSFPHVCVE 553

  Fly   284 CGKKFTNAQESRIKFHIKYHKLQRHVKCPVCGFICSSKETLKEHKQAVH---VRTKCTYCGKTVK 345
            |||.|.:..|  :|.|::.|..::..:|..|.|.|:.:..||.|.::.|   :..||.:|.::..
  Rat   554 CGKGFRHPSE--LKKHMRTHTGEKPYQCQYCVFRCADQSNLKTHIKSKHGNNLPYKCEHCPQSFG 616

  Fly   346 NATLHAHLKKHLE--EGEAELAQQLKKLEQLP-VNLQSQHLSSLESSVAEVTTASEGSNIPGEST 407
            :   ...|::||:  :|.        |..|.| .:.:|.:.|.|:..:..|.|          ..
  Rat   617 D---ERELQRHLDLFQGH--------KTHQCPHCDHKSTNSSDLKRHIISVHT----------KD 660

  Fly   408 VPEDSNVTENSSVPSIETSNHADIQCPMGPPANGEVPDVADVASPSTEPTESVTKCSYC----SD 468
            .|....|.:.......|...|:||                       .....:.:|.:|    ||
  Rat   661 FPHKCEVCDKGFHRPSELKKHSDI-----------------------HKGRKIHQCRHCDFKTSD 702

  Fly   469 TFEKAQQLQAHVLATHTQTRKRRRSSDNQSLVRKTTQEIPTSPIAKITKKQTIESKERVVLESSS 533
            .|    .|..|:|:.||:         :|||..|.         .|...:|..|.|:.:...:..
  Rat   703 PF----ILSGHILSVHTK---------DQSLKCKR---------CKRGFRQQNELKKHMKTHTGR 745

  Fly   534 QLDSTAQQESRTSATSNDSSPVQQVPEKAY-ISCYICGRSFDLKIKLNRHLKQH 586
            ::......|..|:..|.....|..:..|.| ..|..|.:.|....:.|:|:.:|
  Rat   746 KIYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEFCKKGFRRPSEKNQHIMRH 799

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(var)3-9NP_649852.2 zf-AD 18..102 CDD:462262 20/87 (23%)
zf-C2H2_2 253..>334 CDD:463690 26/85 (31%)
C2H2 Zn finger 253..274 CDD:275368 7/20 (35%)
C2H2 Zn finger 281..303 CDD:275368 8/21 (38%)
PHA00732 310..>358 CDD:177300 13/50 (26%)
C2H2 Zn finger 311..332 CDD:275368 7/20 (35%)
C2H2 Zn finger 337..356 CDD:275368 3/18 (17%)
Zfp711XP_002730311.1 Zfx_Zfy_act 65..412 CDD:461400 43/238 (18%)
COG5048 425..803 CDD:227381 87/452 (19%)
C2H2 Zn finger 429..449 CDD:275368 0/19 (0%)
C2H2 Zn finger 522..543 CDD:275368 7/20 (35%)
C2H2 Zn finger 551..571 CDD:275368 8/21 (38%)
C2H2 Zn finger 579..600 CDD:275368 7/20 (35%)
C2H2 Zn finger 608..634 CDD:275368 7/36 (19%)
C2H2 Zn finger 636..657 CDD:275368 4/20 (20%)
C2H2 Zn finger 665..685 CDD:275368 5/42 (12%)
C2H2 Zn finger 722..742 CDD:275368 5/28 (18%)
C2H2 Zn finger 750..771 CDD:275368 4/20 (20%)
C2H2 Zn finger 779..799 CDD:275368 5/19 (26%)

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