DRSC/TRiP Functional Genomics Resources

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Protein Alignment RagA-B and Rraga

DIOPT Version :10

Sequence 1:NP_649850.1 Gene:RagA-B / 41071 FlyBaseID:FBgn0037647 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_848463.1 Gene:Rraga / 68441 MGIID:1915691 Length:313 Species:Mus musculus


Alignment Length:306 Identity:241/306 - (78%)
Similarity:267/306 - (87%) Gaps:3/306 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKKKVLLMGKSGSGKTSMRSIIFANYIARDTTRLGATIDVEHSHVRFLGNLVLNLWDCGGQEGFM 65
            |||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||:.||
Mouse     6 MKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQDTFM 70

  Fly    66 KQYFAQQRDNIFRNVEVLIYVFDVESQEIERDIHYYQSCLEALLQNSPEAKIFCLVHKMDLVPEG 130
            :.||..||||||||||||||||||||:|:|:|:|||||||||:|||||:|||||||||||||.|.
Mouse    71 ENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPDAKIFCLVHKMDLVQED 135

  Fly   131 LRESVFTERMEDLIKLSKPGNVTCFRTSIWDETLYKAWSSIVTMLIPNVAALENSVTHFGNVIEA 195
            .|:.:|.||.|||.:||:|....|||||||||||||||||||..|||||..||.::.:|..:|||
Mouse   136 QRDLIFKEREEDLRRLSRPLECACFRTSIWDETLYKAWSSIVYQLIPNVQQLEMNLRNFAQIIEA 200

  Fly   196 DEVLLFEKATFLVISHCQSKKNRDSHRFEKVSNIIKQFKLSCSKLGAKFQSMEVRNSAFAAFIDT 260
            |||||||:||||||||.|.|:.||.|||||:||||||||||||||.|.|||||||||.||||||.
Mouse   201 DEVLLFERATFLVISHYQCKEQRDVHRFEKISNIIKQFKLSCSKLAASFQSMEVRNSNFAAFIDI 265

  Fly   261 FTSNTYVMVVMSDPTLPSEATLVNIRNARKYFEELE---NPSNSAI 303
            ||||||||||||||::||.|||:|||||||:||:||   .|.:|.:
Mouse   266 FTSNTYVMVVMSDPSIPSAATLINIRNARKHFEKLERVDGPKHSLL 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RagA-BNP_649850.1 RagA_like 4..287 CDD:206744 227/282 (80%)
RragaNP_848463.1 RagA_like 9..292 CDD:206744 227/282 (80%)

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