Protein Alignment RagA-B and RagC-D

DIOPT Version :9

• Sequence 1: NP_649850.1
• Gene: RagA-B / 41071
• FlyBaseID: FBgn0037647
• Length: 311
• Species: Drosophila melanogaster
• Sequence 2: NP_610361.1
• Gene: RagC-D / 35793
• FlyBaseID: FBgn0033272
• Length: 385
• Species: Drosophila melanogaster
• Alignment Length: 299
• Identity: 67/299 - (22%)
• Similarity: 130/299 - (43%)
• Gaps: 38/299 - (12%)

  Fly     2 KKKVLLMGKSGSGKTSMRSIIFANYIARDTTRLGATIDVEHSHVRFLGNLVLNLWDCGGQEGFMK 66
            |.::||||...|||:|::.::|......:|..|.:|..:....:.....:...:||..||..|.:
  Fly    40 KPRILLMGMRRSGKSSIQKVVFHKMSPNETLFLESTSKIVKDDINNSSFVQFQIWDFPGQIDFFE 104

  Fly    67 QYFAQQRDNIFRNVEVLIYVFDVESQEIERDIHYYQSCLEALLQNSPEAKIFCLVHKMDLVPEGL 131
            ..|  ..|.||.....|::|.|.:....|....:..:.|:|...|. ..|....:||:|    |:
  Fly   105 PTF--DSDMIFGGCGALVFVIDAKDDYNEALTKFKNTVLQAYKVNK-RIKFEVFIHKVD----GI 162

  Fly   132 RESVFTERMEDLIK-----LSKPG----NVTCFRTSIWDETLYKAWSSIVTMLIPNVAALENSVT 187
            .:....|...|:.:     |::.|    :::...|||:|.::::|:|.:|..|||.:..|||.:.
  Fly   163 SDDSKMESQRDIHQRSSDDLNEAGLDQIHLSFHLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLN 227

  Fly   188 HFGNVIEADEVLLFEKATFLVISHCQSKKNRDSHRFEKVSNIIKQFKLSCSKLGAKFQSMEVRNS 252
            .|......::..||:..:.:.|:       .||...:     ::.::|.|..:........:.:|
  Fly   228 IFIPNSGIEKAFLFDVVSKIYIA-------TDSSPVD-----MQTYELCCDMIDVVIDLSSIYSS 280

  Fly   253 AFAAFIDTFTSNTYVMVVMSDPTLPSEATLVNIRNARKY 291
            ...|| |:.:|:...:         :..|::.:|...|:
  Fly   281 EETAF-DSGSSSLIKL---------NNNTILYLREVNKF 309

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RagA-B	NP_649850.1	Gem1	2..>146	CDD:224025	36/148 (24%)
		RagA_like	4..287	CDD:206744	64/291 (22%)
RagC-D	NP_610361.1	RagC_like	42..216	CDD:206745	44/180 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45456389
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR11259
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.940