DRSC/TRiP Functional Genomics Resources

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Protein Alignment RagA-B and rraga

DIOPT Version :9

Sequence 1:NP_649850.1 Gene:RagA-B / 41071 FlyBaseID:FBgn0037647 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_956008.1 Gene:rraga / 325358 ZFINID:ZDB-GENE-030131-4083 Length:315 Species:Danio rerio


Alignment Length:304 Identity:239/304 - (78%)
Similarity:268/304 - (88%) Gaps:3/304 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKKKVLLMGKSGSGKTSMRSIIFANYIARDTTRLGATIDVEHSHVRFLGNLVLNLWDCGGQEGFM 65
            |||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||:.||
Zfish     6 MKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQDTFM 70

  Fly    66 KQYFAQQRDNIFRNVEVLIYVFDVESQEIERDIHYYQSCLEALLQNSPEAKIFCLVHKMDLVPEG 130
            :.||..||||||||||||||||||||:|:|:|:|||||||||:|||||:.||||||||||||.|.
Zfish    71 ENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPDVKIFCLVHKMDLVQED 135

  Fly   131 LRESVFTERMEDLIKLSKPGNVTCFRTSIWDETLYKAWSSIVTMLIPNVAALENSVTHFGNVIEA 195
            .|:.:|.||.|||.:||:|.:.||||||||||||||||||||..|||||..||.::.:|..:|||
Zfish   136 QRDLIFKEREEDLKRLSRPLSCTCFRTSIWDETLYKAWSSIVYQLIPNVQQLECNLRNFAQIIEA 200

  Fly   196 DEVLLFEKATFLVISHCQSKKNRDSHRFEKVSNIIKQFKLSCSKLGAKFQSMEVRNSAFAAFIDT 260
            |||||||:||||||||.|.|:.||:|||||:||||||||||||||.|.|||||||||.||||||.
Zfish   201 DEVLLFERATFLVISHYQCKEQRDAHRFEKISNIIKQFKLSCSKLAASFQSMEVRNSNFAAFIDV 265

  Fly   261 FTSNTYVMVVMSDPTLPSEATLVNIRNARKYFEELE---NPSNS 301
            |||||||||:||||::||.|||:||||||::||:||   .|.:|
Zfish   266 FTSNTYVMVIMSDPSIPSAATLINIRNARRHFEKLERVDGPKHS 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RagA-BNP_649850.1 Gem1 2..>146 CDD:224025 120/143 (84%)
RagA_like 4..287 CDD:206744 226/282 (80%)
rragaNP_956008.1 RagA_like 9..292 CDD:206744 226/282 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586399
Domainoid 1 1.000 326 1.000 Domainoid score I1161
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 436 1.000 Inparanoid score I1659
OMA 1 1.010 - - QHG54125
OrthoDB 1 1.010 - - D378768at33208
OrthoFinder 1 1.000 - - FOG0003768
OrthoInspector 1 1.000 - - oto40209
orthoMCL 1 0.900 - - OOG6_102718
Panther 1 1.100 - - LDO PTHR11259
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2625
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.910

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