DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAHbeta and can

DIOPT Version :10

Sequence 1:NP_649849.1 Gene:CAHbeta / 41070 FlyBaseID:FBgn0037646 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_414668.1 Gene:can / 944832 ECOCYCID:EG12319 Length:220 Species:Escherichia coli


Alignment Length:220 Identity:50/220 - (22%)
Similarity:84/220 - (38%) Gaps:62/220 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 EQMVKE----FQKVRDNPEPKAVFFTCMDSRMIPTRYTDTHVGDMFVVRNAGNLIPHAQHFQDEY 77
            :.:|:|    |:|:....:|:.::..|.|||:...|.|....|::||.||..||:.|.       
E. coli    16 KMLVEEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHT------- 73

  Fly    78 FSCEPAALELGCV--------VNDIRHIIVCGHSDCKAMNLLYQLRDPDFASKLNRRLSPLRSWL 134
                    :|.|:        |.::.|||:|||..|..:.          |:..|..|..:.:||
E. coli    74 --------DLNCLSVVQYAVDVLEVEHIIICGHYGCGGVQ----------AAVENPELGLINNWL 120

  Fly   135 CTHANTSLERFQEWRDAGMKDPLIFSSETPLRRFVAYIDEEQKFALEDKLSQINTLQQMSNIASY 199
             .|.          ||...|...:.......||.             |.|.::|.::|:.|:...
E. coli   121 -LHI----------RDIWFKHSSLLGEMPQERRL-------------DTLCELNVMEQVYNLGHS 161

  Fly   200 GFLK-ARLESHDLHIHALWFDIYTG 223
            ..:: |......:.||...:.|:.|
E. coli   162 TIMQSAWKRGQKVTIHGWAYGIHDG 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAHbetaNP_649849.1 beta_CA_cladeB 7..228 CDD:238449 50/220 (23%)
canNP_414668.1 PRK10437 1..220 CDD:182460 50/220 (23%)

Return to query results.
Submit another query.