DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAHbeta and bca-1

DIOPT Version :9

Sequence 1:NP_649849.1 Gene:CAHbeta / 41070 FlyBaseID:FBgn0037646 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_741809.1 Gene:bca-1 / 180890 WormBaseID:WBGene00000245 Length:270 Species:Caenorhabditis elegans


Alignment Length:257 Identity:127/257 - (49%)
Similarity:164/257 - (63%) Gaps:6/257 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MERILRGIMRYRNTTREQMVKEFQKVRDNPEPKAVFFTCMDSRMIPTRYTDTHVGDMFVVRNAGN 65
            |.:||||::::|||.|:.:||:|:::::||.|.||.||||||||:|||:|.:.||||||||||||
 Worm     1 MNKILRGVIQFRNTIRKDLVKQFEEIKNNPSPTAVMFTCMDSRMLPTRFTQSQVGDMFVVRNAGN 65

  Fly    66 LIPHAQH---FQDEYFSCEPAALELGCVVNDIRHIIVCGHSDCKAMNLLYQLRDPDFASKLNRRL 127
            :||.|.:   |.:...:.|||||||......||||:|||||||||:|.||.|..   ..|.....
 Worm    66 MIPDAPNYGAFSEVSVNTEPAALELAVKRGGIRHIVVCGHSDCKAINTLYGLHQ---CPKNFDVT 127

  Fly   128 SPLRSWLCTHANTSLERFQEWRDAGMKDPLIFSSETPLRRFVAYIDEEQKFALEDKLSQINTLQQ 192
            ||:..|:..:...|::|..|....|.......|...|.:.|.|.||.....|:||||||||.|||
 Worm   128 SPMDHWVRRNGFASVKRLNERLHRGPSSMKFESEVAPSQSFDAIIDPMDTLAMEDKLSQINVLQQ 192

  Fly   193 MSNIASYGFLKARLESHDLHIHALWFDIYTGDIYYFSRGAKRFLPVDEDTVDRLSEEVRRFY 254
            :.||.|:.|||..|||..||||.:|||||.|:.|.||:..|||:.:||.||..|..|:...|
 Worm   193 LINICSHEFLKEYLESGRLHIHGMWFDIYKGEDYLFSKDKKRFVVIDEKTVTDLLAELNARY 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAHbetaNP_649849.1 beta_CA_cladeB 7..228 CDD:238449 111/223 (50%)
bca-1NP_741809.1 beta_CA_cladeB 7..228 CDD:238449 111/223 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167093
Domainoid 1 1.000 179 1.000 Domainoid score I2105
eggNOG 1 0.900 - - E1_COG0288
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H25497
Inparanoid 1 1.050 240 1.000 Inparanoid score I2104
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48332
OrthoDB 1 1.010 - - D1136193at2759
OrthoFinder 1 1.000 - - FOG0003269
OrthoInspector 1 1.000 - - otm14498
orthoMCL 1 0.900 - - OOG6_100995
Panther 1 1.100 - - LDO PTHR11002
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R16263
SonicParanoid 1 1.000 - - X7634
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.800

Return to query results.
Submit another query.